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Home > Genomes > NCBI plasmid sequences > gi|158341563|ref|YP_001522727.1|NC_009933

Domain assignment for gi|158341563|ref|YP_001522727.1|NC_009933 from NCBI plasmid sequences

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Strong hits

Sequence:	gi\|158341563\|ref\|YP_001522727.1\|NC_009933
Domain Number 1	Region: 513-649
Classification Level	Classification	E-value
Superfamily	TPR-like	4.93e-31
Family	Tetratricopeptide repeat (TPR)	0.0016
Further Details:

Domain Number 2	Region: 427-548
Classification Level	Classification	E-value
Superfamily	TPR-like	1.67e-27
Family	Tetratricopeptide repeat (TPR)	0.0016
Further Details:

Domain Number 3	Region: 348-464
Classification Level	Classification	E-value
Superfamily	TPR-like	1.26e-22
Family	Tetratricopeptide repeat (TPR)	0.01
Further Details:

Domain Number 4	Region: 1-220
Classification Level	Classification	E-value
Superfamily	P-loop containing nucleoside triphosphate hydrolases	1.53e-20
Family	Helicase-like "domain" of reverse gyrase	0.073
Further Details:

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Cellular Component	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

Molecular Function	IC (bits)	H-Score

External link(s)	gi\|158341563\|ref\|YP_001522727.1\|NC_009933
Sequence length	653
Comment	TPR repeat-containing protein [Acaryochloris marina MBIC11017 plasmid pREB8]
Sequence	MGGIGKTELALQYAISQLNLGHYLGGLCWLRVKGQELAAQIIEFARTKLALALPDGLDED QQVSYIWGQWPAGKVLIIFDDVMDLETIEPYLPPSDPRYKVLITTRQNLGLSVNPLSITE LNDTSALFLLRTLVGAKRIDPQLDDAQALCRWVGNLPLGLELVGRYLANKPDWSLHKLIK RLESKRLDAKALTERESGMTAQFGVAAALELSWVELSETEEELACFLGMFAVAPIPWTLV ESCLSEQDPDDLEDTRDKGLIARNLLKRVDQGTYQLHQIVQEYFRIQLHQRPDQGESLKA AYCRGMVVAAQEIDYSLTTEVIAQMTAKIPHLEELINQRIDSLNDGELTWPYVGISRFYE GQGNYGLALPWRQKCLEQTRQRLGSEHPDVARSLNNLAFLYDEQGRYTEAEPLYVQALEM QKKLLGSEHPDVARSLNNLAALYDNQGRYTEAKPLYVQALEMRQKLLGSEHSDVALSLNN LALLYKKQGRYSEAEPLYVQALEMSQKLLGSEHPLVATSLNNLAVLYKNQGRYSEAEPLY VQALEMRQKLLGSEHPSVATSLNNLAFLYYEQGRYTEAEPLYVQALEMSQKLLGSEHPDV ARSLNNLAFLYDNQGRYEEAISDFQQALSIAEVALGPEHPTTLVIRNNLESLL
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Identical sequences	A8ZQX7 gi\|158341563\|ref\|YP_001522727.1\| gi\|158341563\|ref\|YP_001522727.1\|NC_009933 329726.AM1_H0063

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