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Domain assignment for gi|170079645|ref|YP_001736279.1|NC_010480 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|170079645|ref|YP_001736279.1|NC_010480
Domain Number 1 Region: 258-408,585-751
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.32e-20
Family Tandem AAA-ATPase domain 0.011
Further Details:      
 
Weak hits

Sequence:  gi|170079645|ref|YP_001736279.1|NC_010480
Domain Number - Region: 5-65,93-147
Classification Level Classification E-value
Superfamily Phospholipase D/nuclease 0.000115
Family Nuclease 0.086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|170079645|ref|YP_001736279.1|NC_010480
Sequence length 959
Comment helicase domain-containing protein [Synechococcus sp. PCC 7002 plasmid pAQ6]
Sequence
MQNFPVTWFESGATIKQIKHYFSQGKSEIRIASGFFTLRGWGFIRSSTKNKKVYLLVGID
EPGEERARKLLIDAILLDLRTGLDRERRQTVLDLIAKIESNNFHIVDARATDHHAKLYIV
DSDTAIVTSSNTTGKGLVEQIESGCIYSSLLVDQYIQQTNNASQEIKTELNSYITQQVAE
LIKKFNDYFSNAIDITQELLTHLKKWLELCRPWDIYLKTILALDQTKEVSTTYDKEPLIY
QKDMISLALKQIKEYGGSMLVASTGLGKTVIGTWIAVHLHKENIIDNVIVLCPNPVKKSW
RYEIGDASIHADYFTLEILDKKTGNAQGLDDWERIRQKIKEKKSRYLLIFDESHKLRKRY
PDQFGNKYSKLEKRRERKAFQRINELVNEIATMEQVRVLLLTGSPYATDINNINVQLHLL
PHTSKDYKPYLLPEYFDDSSTWKIEEPEDFTELPVAQQLTTPHVAKYYSEKDEKGLYVLF
GEKRKYFPEINLFTLEFPLFPQSESNLEWDLLSCIKEGYFDLNTPHPMFRKNILTQVKRS
WSSSPSALLNTLYQVVDTPGGEREYDFVKKEKSEFLITREERQTKLNPIIKKLESFSIDQ
DLKVQSLLRIIERHSPKEKIVIFTELYPTAIYLEETILKYNPNLEVFCTISKEMISNRHY
EYKAKSLKKVEEAINLFAPVANNFVPNDRQKLKNYDIFITTDNYGIGVNMQDASVVVNYD
IAWTPIEPIQRAGRILRLWEEFRTVQVYTLIPKSQMSAELESEFLDIGKRWKNLMHRHEE
SRKLTDLPVLTSEFNQNVAIPKFAPEILVEKGRFTLENADDKDISPFFMHTRKLHQHRKY
TQSLPSDLRSALLYKGRVALLFLLLSVDGEYQTLLFNPESKEFQSHTPESLLNIIECQQE
TPVAMLHPNVIEELSDEAIQKYCIQKKIDENTIIRECVLYLQPKTEEKLTEFSQSFLSN
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Identical sequences B1XR93
32049.SYNPCC7002_F0092 gi|170079645|ref|YP_001736279.1|NC_010480 gi|170079645|ref|YP_001736279.1| WP_012308634.1.22074 WP_012308634.1.52632 WP_012308634.1.62705

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