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Domain assignment for gi|186471203|ref|YP_001862521.1|NC_010625 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|186471203|ref|YP_001862521.1|NC_010625
Domain Number 1 Region: 145-633
Classification Level Classification E-value
Superfamily PLP-dependent transferases 1.75e-113
Family Ornithine decarboxylase major domain 0.000000000481
Further Details:      
 
Domain Number 2 Region: 637-786
Classification Level Classification E-value
Superfamily Ornithine decarboxylase C-terminal domain 3.66e-40
Family Ornithine decarboxylase C-terminal domain 0.000034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|186471203|ref|YP_001862521.1|NC_010625
Sequence length 787
Comment ornithine decarboxylase [Burkholderia phymatum STM815 plasmid pBPHY01]
Sequence
MVPRSIKAPTIPIAFHKLLKVVAIVDGNDAQSGELLAEITAEHYRVEVTDSYTRDVNEDA
DVGAYIILIDGARLEPARKLAAAVRSLGFRTPLWALANTHRLSDLAVTGGLGEVDGYIYL
GQQSPIFYAKQVMGSLVKYGLSLLPPFFGGLVAYDAEANIAFDCPGHQGGQFYRKSPAGQ
LFFKHFGESIFRNDLCNADVDLGDLLIHEGAAADAQRHAAEVFGADQTYFVLNGTSTSNK
IVTGAVLKRGDLVLFDRNNHKSLHQGALVQAGAIPIFLPTSRNAFGMIGAVDWEAWSEDY
LREQIRNSPLVEDRERAGAARPFRLACIQLATYDGTIYNVRKVLERIGHLCDYVLWDEAW
IGYNAFHPLFNDHSPMRLKDLTPDMPGLFSTQSVHKQGAGFSQASQVHKRDEHIRGQKRY
IEHKRFNESFLIHASTSPFYPLFASLDVNAKVHEGKAGEMLWDSCIELGIEARKKFRQFA
RHYEVTGRNAQEQWFFDPFVPDVVDIRNSNFMADASNVMWEDIPTDVIKHEQQCWEFRPE
AAWHGYTGYADGYVMADPNKLNLLTPGIDRKTGEYLDFGVPATVVANYLREEGIVPEKCD
LNSLLFLMTPAEDESKLNTLIARFVKFKNLWDRDAALAEVLPSLCAAHGSRYQGYTLRQV
CNEMHTFYREANVKNLQRLCFRASSFPELAMSPKEAYEALVANRVDYVPLDQAKNRISAT
LALIYPPGIGVVLPGERWDDRAQPMLDYFMAFQESFNRFPGFNYEVQGVFQEREDGRIRF
YTYVVSE
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Identical sequences B2JWZ8
WP_012405634.1.55900 gi|186471203|ref|YP_001862521.1|NC_010625 391038.Bphy_6445 gi|186471203|ref|YP_001862521.1|

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