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Domain assignment for gi|189913135|ref|YP_001965023.1|NC_010846 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|189913135|ref|YP_001965023.1|NC_010846
Domain Number 1 Region: 6-141,321-469,499-772,813-837
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.69e-88
Family Tandem AAA-ATPase domain 0.00017
Further Details:      
 
Domain Number 2 Region: 923-1184
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 2.95e-40
Family Exodeoxyribonuclease V beta chain (RecB), C-terminal domain 0.00033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|189913135|ref|YP_001965023.1|NC_010846
Sequence length 1209
Comment exodeoxyribonuclease V subunit beta [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' plasmid p74]
Sequence
MKMDHPLVNHPNFIEASAGTGKTHLIMQMLGDVMTHDVTNHTKENRLLQFLVLTFTEKAA
GELKARLKLKILELYENGKHPEYYHYLRDLDQVTISTIHGFCNMVLTEYPVETQNNPNVK
LTSNEELIRKTFYDLKRSQWEGRDKESLANDILISNLKKKEDLVISSTSKLLADTKDYVF
PEFVSLEECIHNANKSNLLGELITICEAFKGPTGEAIAAQGAKGSIPKWMENWSSLESFA
KAIRNEDTKYIAKELKRISKLSRSLGKEGKASGFDYFLLEGSTTIAKNLDAASVVLQGKI
KSVVLSLKEIFPLGQLDYDGSIFLQNTVHELTSKTKSIIENGEYLTYDQMILKVYDVIVR
NPNQILIQSLRERFQVCILDEFQDTDKNQYQIFKTLFLDKDTKSRMLFCIGDPKQSIYGF
RGADIGIYLEASRDFEGSKSTLETNYRSTKELIHGLNTIFHDETKEWGETHFFPIEEPGS
SKENYLYKKVSSPDIDTIKYKYVNPEESAIHIFDFEERFPNVNKSRNIWAETIRNEIKRI
QNKETSLLYNKKGEREIQEIKLKDIAILCGNKKETELVEFYLTKAGIPCSIYKQRGIYQS
READQIENLLECLQSSNSSQSYKKILFSDIFCIHPHEIQKFDEHSIDSYEKSLIDKWQRL
IKENRYASFFRSVMDETKLFWLEGNHTLEWERKRTNFRQIFQKLLEVQLKSNCGLLELLA
SLRELKQKKQSPEEEPLFDRETEEDSVQILTIHASKGLEWPVVFLFYFGNRGTNLTNTEY
PIEIETPEGKKRKWILDLWDLNPEKEDEENHFLNEQKRLLYVALTRPNLRLYLPKLNWGR
SKKEDSLPNSGYSQILYQELIRIQTLQNQNPFLESSFVFRNPNEFSESQTINLQTSSVTQ
TKKPSFPILYPSEIKIGRVLLQHSYTSLQANEKNLNVSQEEKKKELEETPDVEVSTTFEL
PSSAKVGNFLHKILELCDFSTFQLEVDAILESPSWKWAYQKSFLRYPLEIEGKDAKIEHT
VATLLKHAMTAKIKLATGNSFSLSELKEEEKSAELKFHLFLQNLLKESGASLTDGFEHYL
KGAIDLVFVKDQKFYIVDYKSNLLPNNDYSSEAVANAVRDKGYLFQKSVYSFILFEYLKS
LFGPDIALEKFGGVYYLFLRGMLGDNQTGIYSDLKHSDSVWTIEQFEGIKKEVMAYIRSA
SDQLEKVYS
Download sequence
Identical sequences B0SUF0
WP_012476771.1.33202 WP_012476771.1.95533 gi|189913135|ref|YP_001965023.1| gi|189913135|ref|YP_001965023.1|NC_010846 gi|189913470|ref|YP_001964698.1|NC_010844 gi|189913470|ref|YP_001964698.1| 355278.LBF_5019 456481.LEPBI_p0020

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