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Domain assignment for gi|194733850|ref|YP_002112888.1|NC_011092 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|194733850|ref|YP_002112888.1|NC_011092
Domain Number 1 Region: 81-156
Classification Level Classification E-value
Superfamily ParB/Sulfiredoxin 0.000000000523
Family ParB-like nuclease domain 0.014
Further Details:      
 
Weak hits

Sequence:  gi|194733850|ref|YP_002112888.1|NC_011092
Domain Number - Region: 159-245
Classification Level Classification E-value
Superfamily KorB DNA-binding domain-like 0.000863
Family KorB DNA-binding domain-like 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|194733850|ref|YP_002112888.1|NC_011092
Sequence length 323
Comment plasmid partition protein SopB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 plasmid pCVM19633_110]
Sequence
MKRAPVIPRHTTHSQSTEDTSSPAPAAPMVDSLIARVGAMARGNAISLPVCGREVKFTLE
VLRGDSVESASRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSDVIEIADGS
RRRKAAILTESDYRVLVGELDDEQMAALSRLGNDYRPTSAYERGLRYTSRLQNEFAGNIS
ALADAENISRKIITRCINTAKLPKSVVALFAHPGELSARSGEALQKAFADKEELLKQQAE
TLHDQKKAGLIFEAEEVISLLTSVLKQSPASRVNLSSRHQFAPGATALYKGDKMVLNLDR
SRIPAECIEKIEAILKELEKPGV
Download sequence
Identical sequences A0A0U1RFD7 A0A141AZW1 A0A1Z1VVQ9 A0A271C847 E5L754 Q5J3T6
321314.SC153 439843.SeSA_B0006 WP_000817037.1.100496 WP_000817037.1.12398 WP_000817037.1.13824 WP_000817037.1.15768 WP_000817037.1.17270 WP_000817037.1.17734 WP_000817037.1.18133 WP_000817037.1.19684 WP_000817037.1.21020 WP_000817037.1.21024 WP_000817037.1.21033 WP_000817037.1.21656 WP_000817037.1.22118 WP_000817037.1.22270 WP_000817037.1.22683 WP_000817037.1.22692 WP_000817037.1.23486 WP_000817037.1.23520 WP_000817037.1.25397 WP_000817037.1.26125 WP_000817037.1.28962 WP_000817037.1.29239 WP_000817037.1.2942 WP_000817037.1.32093 WP_000817037.1.33486 WP_000817037.1.33631 WP_000817037.1.34200 WP_000817037.1.34332 WP_000817037.1.34538 WP_000817037.1.35074 WP_000817037.1.35114 WP_000817037.1.35368 WP_000817037.1.36618 WP_000817037.1.36988 WP_000817037.1.40140 WP_000817037.1.41271 WP_000817037.1.42113 WP_000817037.1.42318 WP_000817037.1.42936 WP_000817037.1.43213 WP_000817037.1.43473 WP_000817037.1.44339 WP_000817037.1.44452 WP_000817037.1.44841 WP_000817037.1.45648 WP_000817037.1.464 WP_000817037.1.47224 WP_000817037.1.48247 WP_000817037.1.49823 WP_000817037.1.50262 WP_000817037.1.51607 WP_000817037.1.53364 WP_000817037.1.53594 WP_000817037.1.54585 WP_000817037.1.5470 WP_000817037.1.54755 WP_000817037.1.54984 WP_000817037.1.57902 WP_000817037.1.58837 WP_000817037.1.58949 WP_000817037.1.59043 WP_000817037.1.59501 WP_000817037.1.60322 WP_000817037.1.6061 WP_000817037.1.61858 WP_000817037.1.63448 WP_000817037.1.64749 WP_000817037.1.64784 WP_000817037.1.65968 WP_000817037.1.66709 WP_000817037.1.67990 WP_000817037.1.6814 WP_000817037.1.7044 WP_000817037.1.70845 WP_000817037.1.72184 WP_000817037.1.74058 WP_000817037.1.74285 WP_000817037.1.74309 WP_000817037.1.74713 WP_000817037.1.75124 WP_000817037.1.75139 WP_000817037.1.75593 WP_000817037.1.75633 WP_000817037.1.76186 WP_000817037.1.77813 WP_000817037.1.79764 WP_000817037.1.80061 WP_000817037.1.80884 WP_000817037.1.81675 WP_000817037.1.8304 WP_000817037.1.83150 WP_000817037.1.83290 WP_000817037.1.83941 WP_000817037.1.84989 WP_000817037.1.85469 WP_000817037.1.85511 WP_000817037.1.88557 WP_000817037.1.90073 WP_000817037.1.92845 WP_000817037.1.97200 WP_000817037.1.97798 WP_000817037.1.98442 gi|194733850|ref|YP_002112888.1| gi|194733850|ref|YP_002112888.1|NC_011092 gi|313116754|ref|YP_004032904.1|NC_014725 gi|60115659|ref|YP_209450.1|NC_006856 ABEJ01000039|CDS_10108-11079 AY509004|CDS_115474-114503 CP001125|CDS_4467-3496 gi|60115659|ref|YP_209450.1|

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