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Domain assignment for gi|241113409|ref|YP_002973244.1|NC_012848 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|241113409|ref|YP_002973244.1|NC_012848
Domain Number 1 Region: 438-699
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 9.59e-62
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.00000141
Further Details:      
 
Weak hits

Sequence:  gi|241113409|ref|YP_002973244.1|NC_012848
Domain Number - Region: 318-364
Classification Level Classification E-value
Superfamily HAMP domain-like 0.000235
Family HAMP domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|241113409|ref|YP_002973244.1|NC_012848
Sequence length 714
Comment methyl-accepting chemotaxis sensory transducer [Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501]
Sequence
MLHFWNKFGIRAQITSGFVPLILLMSLLTVSAISGMNGLASIFSSYRATAGQSLAISDYS
DQLNEIQMSAEAFRSTPTQDVVDRFRAGVKAFDADDPRFAGNKDLQSGLAAIRQDIATYG
KAFEQIVALQARRDALISKVTEFGPWTSIALNDVVRSAWRQNDVALLQMTAATLEALNRS
LYFSERFVHSDDFAAYDTAQAALAEAVALNEAAAKAAKNELQKKRLMGAGQLMQNYTARL
GDMKDVLQASGNIRQTQLSVLAPKISGGFKDLQATVTGAQKTLDGSVDATVASATSTTLV
ISGLLIVIGLVLSYFVGRLISSAVRNMAQSMEQLARGEEGIVITGVEHRHELGAMARSLK
VFQETGRAKLIAEANADRARLAAEEERLRQEAERLSDAQVMEHAFRQISVGLDALSKGDL
TVRVGEVDHRYVRIRDHFNNSVASLEEAVDAVIRAVGTIRSGLAEISTASNDLARRTEQQ
AASLEETVAALGEVTRGVNGTAEGASRAQGVVATARTNAEKGGEIVARAIDAMTEIQNSS
SKIGNIISVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAREIK
QLISTSSAQVKTGVQLVGESGLSLEQIVEQVTAMNATVAEIAVAAREQATSLREVSAAGD
QMDKVTQQNAAMVEETTAAAQSLTHETESLAELLRRFRTGSGRASEHRHYAMAS
Download sequence
Identical sequences C6B5C5
gi|241113409|ref|YP_002973244.1| 395491.Rleg_5069 gi|241113409|ref|YP_002973244.1|NC_012848 WP_012755430.1.14669 WP_012755430.1.67177

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