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Domain assignment for gi|28373188|ref|NP_783831.1|NC_004565 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|28373188|ref|NP_783831.1|NC_004565
Domain Number 1 Region: 2-555
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 8.24e-199
Family Clostridium neurotoxins, catalytic domain 0.000000000215
Further Details:      
 
Domain Number 2 Region: 559-884
Classification Level Classification E-value
Superfamily Clostridium neurotoxins, "coiled-coil" domain 2.62e-116
Family Clostridium neurotoxins, "coiled-coil" domain 0.000000164
Further Details:      
 
Domain Number 3 Region: 1112-1314
Classification Level Classification E-value
Superfamily STI-like 2.75e-68
Family Clostridium neurotoxins, C-terminal domain 0.00000000213
Further Details:      
 
Domain Number 4 Region: 882-1096
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.45e-43
Family Clostridium neurotoxins, the second last domain 0.00000000317
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|28373188|ref|NP_783831.1|NC_004565
Sequence length 1315
Comment tetanus toxin tetX [Clostridium tetani E88 plasmid pE88]
Sequence
MPITINNFRYSDPVNNDTIIMMEPPYCKGLDIYYKAFKITDRIWIVPERYEFGTKPEDFN
PPSSLIEGASEYYDPNYLRTDSDKDRFLQTMVKLFNRIKNNVAGEALLDKIINAIPYLGN
SYSLLDKFDTNSNSVSFNLLEQDPSGATTKSAMLTNLIIFGPGPVLNKNEVRGIVLRVDN
KNYFPCRDGFGSIMQMAFCPEYVPTFDNVIENITSLTIGKSKYFQDPALLLMHELIHVLH
GLYGMQVSSHEIIPSKQEIYMQHTYPISAEELFTFGGQDANLISIDIKNDLYEKTLNDYK
AIANKLSQVTSCNDPNIDIDSYKQIYQQKYQFDKDSNGQYIVNEDKFQILYNSIMYGFTE
IELGKKFNIKTRLSYFSMNHDPVKIPNLLDDTIYNDTEGFNIESKDLKSEYKGQNMRVNT
NAFRNVDGSGLVSKLIGLCKKIIPPTNIRENLYNRTASLTDLGGELCIKIKNEDLTFIAE
KNSFSEEPFQDEIVSYNTKNKPLNFNYSLDKIIVDYNLQSKITLPNDRTTPVTKGIPYAP
EYKSNAASTIEIHNIDDNTIYQYLYAQKSPTTLQRITMTNSVDDALINSTKIYSYFPSVI
SKVNQGAQGILFLQWVRDIIDDFTNESSQKTTIDKISDVSTIVPYIGPALNIVKQGYEGN
FIGALETTGVVLLLEYIPEITLPVIAALSIAESSTQKEKIIKTIDNFLEKRYEKWIEVYK
LVKAKWLGTVNTQFQKRSYQMYRSLEYQVDAIKKIIDYEYKIYSGPDKEQIADEINNLKN
KLEEKANKAMININIFMRESSRSFLVNQMINEAKKQLLEFDTQSKNILMQYIKANSKFIG
ITELKKLESKINKVFSTPIPFSYSKNLDCWVDNEEDIDVILKKSTILNLDINNDIISDIS
GFNSSVITYPDAQLVPGINGKAIHLVNNESSEVIVHKAMDIEYNDMFNNFTVSFWLRVPK
VSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNLIWTLKDSAGEVRQITFRDLP
DKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITGLGAIREDNNITLKLDRCNNN
NQYVSIDKFRIFCKALNPKEIEKLYTSYLSITFLRDFWGNPLRYDTEYYLIPVASSSKDV
QLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEIDSFVKSGDFIKLYV
SYNNNEHIVGYPKDGNAFNNLDRILRVGYNAPGIPLYKKMEAVKLRDLKTYSVQLKLYDD
KNASLGLVGTHNGQIGNDPNRDILIASNWYFNHLKDKILGCDWYFVPTDEGWTND
Download sequence
Identical sequences P04958
gi|28373188|ref|NP_783831.1|NC_004565 WP_011100836.1.27827 WP_011100836.1.49058 WP_011100836.1.83101 WP_011100836.1.96257 gi|28373188|ref|NP_783831.1| 212717.pE88_60

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