SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|288962165|ref|YP_003452460.1|NC_013858 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|288962165|ref|YP_003452460.1|NC_013858
Domain Number 1 Region: 205-513
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 1.23e-50
Family FAD/NAD-linked reductases, N-terminal and central domains 0.00000775
Further Details:      
 
Domain Number 2 Region: 1-100
Classification Level Classification E-value
Superfamily Thioredoxin-like 2.24e-29
Family PDI-like 0.00013
Further Details:      
 
Domain Number 3 Region: 104-196
Classification Level Classification E-value
Superfamily Thioredoxin-like 1.15e-22
Family PDI-like 0.0000493
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|288962165|ref|YP_003452460.1|NC_013858
Sequence length 531
Comment alkyl hydroperoxide reductase subunit F [Azospirillum sp. B510 plasmid pAB510d]
Sequence
MLDATLKTQLKAYLERITHPIALVASLDGGAKSQEMLGLLEDIAGLSDKIALDLNGHDAR
KPSFAINRVGTDYGVTFAGLPMGHEFNSLVLALLQVGGHPSKESEELLEQIRNLDGDFRF
ETYFSLTCQNCPDVVQALNLMSALNPRIKHVAIDGALFQQEVEQRQVMAVPTVFLNGEPF
AQGRMDVAQIVAKLDTGAVARAAEKIKAKAPFEVLVIGGGPAGAAAAIYAARKGIRTGVA
AERFGGQVLDTMAIENFISVSHTEGPKLAAALEQHVKDYEVDVMNLQTATALVPASREGG
LIEVKLASGASLRSRTVVLSTGARWRSMNVPGEAEYRNKGVAYCPHCDGPLFKGKRVAVI
GGGNSGVEAAIDLAGIVSHVTLIEFDSQLRADAVLQRKLHSLPNVTVLVSAQTTEVHGDG
GKVVGLSYKDRVGGEVKRLELEGIFVQIGLVPNTEWLKGTLALTPRGEIEVDNRGQTSLP
GVFAAGDATTVPFKQIIIAMGEGAKASLAAFDHLIRTVPAEEAAPATIAAE
Download sequence
Identical sequences D3P5I7
WP_012977725.1.27297 gi|288962165|ref|YP_003452460.1| gi|288962165|ref|YP_003452460.1|NC_013858

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]