SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|300698344|ref|YP_003749005.1|NC_014309 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|300698344|ref|YP_003749005.1|NC_014309
Domain Number 1 Region: 141-381
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.94e-71
Family Extended AAA-ATPase domain 0.00000157
Further Details:      
 
Domain Number 2 Region: 1-186
Classification Level Classification E-value
Superfamily CheY-like 3.84e-38
Family CheY-related 0.0011
Further Details:      
 
Domain Number 3 Region: 353-445
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00000000000237
Family FIS-like 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|300698344|ref|YP_003749005.1|NC_014309
Sequence length 462
Comment response regulator in two-component reguatory system (EBP family) [Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp]
Sequence
MPHILIVEDDASARAALGELVSAEGFTTAQAGSLRDARIQISRHSPDAVLIDLVLPDGNG
MDLLEDIPSHSGTEIIVMTGHASVETAVEALRMGAADYLVKPVNFQRLKSILARIPRPGD
LKAEIGNLRGELRRLGLFGQMLGNSSAMQTLYDQVSRVAPTEATVLLIGESGTGKELAAQ
TIHDLSLRRKQPFLPVNCGAISPNLIESEMFGHERGSFTGADRQHKGYFERANGGTLFLD
EITEMPVELQVKLLRVLETGVFMRVGTNREIDTDVRVIAATNRDPEEAVADGKLRADLYH
RLNVFPLQLPPLRERGKDVELLAQHFLDQLNAHNNTKKTFLPQAMDTLRAYNWPGNVREL
RNYVQRAYIMSDDTGISTEAVPLQVSTTQTSSGSTLTIPVGTSLASADKKIILATLEQCG
GVKKRAAELLGISLKTLYNRLEEYGNSSNSEGENGKAQTTEA
Download sequence
Identical sequences D8P6V3
gi|300698344|ref|YP_003749005.1| gi|300698344|ref|YP_003749005.1|NC_014309 WP_013209095.1.85682

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]