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Domain assignment for gi|308185391|ref|YP_003929523.1|NC_014561 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|308185391|ref|YP_003929523.1|NC_014561
Domain Number 1 Region: 231-515
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 1.66e-70
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.000000528
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|308185391|ref|YP_003929523.1|NC_014561
Sequence length 552
Comment methyl-accepting chemotaxis citrate transducer [Pantoea vagans C9-1 plasmid pPag1]
Sequence
MTITQRLVLIFSLLAMSLIALVIISLSVISGFQSRFEYVQVNAIPSIRDLNKSISVTNQI
GIALYRHQSTNDATKLPAAEERIENLLQQVKSLNDYYMANDISSDEDKAMTEQAYKNLDA
VRSALPEFLAASRAHNDAVTLPLLQSDNGVGAAARKMEADFTRQIQLNIDIGEQLRAENK
RIYSQTLWAMSGGSLLLVLLLAGFSAKVILGIKRSLSGIVNTMTQVSHTLDLTHTAEVSS
KDEIGKTAMAFNQLLSRVSGTLLSVSHAAQSVSAGSTQIAAGNEDLSARTEEQAASLEQT
AASMATLSETVRQNSEGAHQASSLANNANDMSIQNGTSVKQMLNTMDEIRASSAKISEIT
GLIEGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRNLAQRSSSAAREIKDLISTSV
SQVEHGLEQASGVGSNSENVRQAIQQVADLVNEIAAATSEQSKGIEQVHQAIGQMDEVTQ
QNASLVEEASSASKSLQEQAETLSGLVATFTLESNQRAAQSQQPAGVRRPVLQAKQPARH
TVDMTQANWESF
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Identical sequences E1PKB6
WP_013356505.1.72025 gi|308185391|ref|YP_003929523.1|NC_014561 gi|308185391|ref|YP_003929523.1|

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