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Domain assignment for gi|334143050|ref|YP_004537926.1|NC_015582 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|334143050|ref|YP_004537926.1|NC_015582
Domain Number 1 Region: 88-185
Classification Level Classification E-value
Superfamily KorB DNA-binding domain-like 3.53e-22
Family KorB DNA-binding domain-like 0.0028
Further Details:      
 
Domain Number 2 Region: 4-98
Classification Level Classification E-value
Superfamily ParB/Sulfiredoxin 0.00000000000000767
Family ParB-like nuclease domain 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|334143050|ref|YP_004537926.1|NC_015582
Sequence length 592
Comment ParB family chromosome partitioning protein [Novosphingobium sp. PP1Y plasmid Spl]
Sequence
MTTTLKLSQLRLSPLNVRKVEPTGIEALADDIHAHGLIQNLGVYEDAGKFWVFAGGRRFR
ALELLKKRKDVPASFPVPVIIKDKAEAIELSLVENTQRENMHPADAVSAFAQLRDEGGMS
AEDIAARFGYSTGHVAKLLRLGSLAPALLEAFAADTIGMEAAQALTMSEDHAAQIEAFER
CGNSPAAIRRALTVEKVRTDSSTFCFVGLEAYEASGGTITRDLFGETGYADDPALLDELV
AAKLDGIRTGFEAEGWKVVEVAAEAPHDIYSRGYLRPETREATDEEEAQLTALDAQIEAL
EVEGGEDSEEAAALFEQRDVITEGLEAFTDAQKANGGVCAYIGYKGDLVLRHWTVYVEPA
SAKVEESGPYAASMIERLTAIRTMALQQEVAAQPALALDILLDSMTAQLIHGLHSYDLAA
DIHPTVTRHTVEQDMLDGSRLADLPAQLVERFADIPADGRFEVIRAMDEADKMQLLAALV
ATSINGTIFNHGGIGARQATADKYADAAGLDLRQHWNPGQTFFDRLKKSSLLAILADECG
EEAAENCAKMKKSDLAIAVNERLPVGWLPKPARRFTPFPEQPTDEGEMSKVA
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Identical sequences F6IBT5
gi|334143050|ref|YP_004537926.1|NC_015582 WP_013836216.1.5499 gi|334143050|ref|YP_004537926.1|

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