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Domain assignment for gi|339323786|ref|YP_004682679.1|NC_015724 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|339323786|ref|YP_004682679.1|NC_015724
Domain Number 1 Region: 3-303,501-560
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 1.09e-66
Family FAD-linked reductases, N-terminal domain 0.0015
Further Details:      
 
Domain Number 2 Region: 350-425
Classification Level Classification E-value
Superfamily FAD-linked reductases, C-terminal domain 0.0000000108
Family GMC oxidoreductases 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|339323786|ref|YP_004682679.1|NC_015724
Sequence length 563
Comment choline dehydrogenase BetA [Cupriavidus necator N-1 plasmid pBB2]
Sequence
MTFYDDLIVGAGAAGSVLANRLSADPQRRVLLLEAGRDIRPGDEPADIRSIFPLSTFNPA
YMWPDTLVHWGRANGTAPSFFPQGRLLGGTSQIMGMFALRGRPEDYDDWAAMGAAGWGWD
DVLPFFRKLESDHDFSGTMHGCDGPVPIRREPQAQWSPLSARLHQVAAARGFSHVADMNA
DFGDGYGTLPISRYPDKRGSAGICYLDAAVRARSNLTVQAGATVSRLLLERRDGALHCTG
VACTDAQGQVRQIRARRVLLAAGALRTPALLLRAGIGPGDELTRLGIAPQLERKGVGRNL
QNHAILYVVAFLARAGREPGGVRPACATTMRWSSAQHGGTPGDMGMYIRSWLSWHALGHR
MASLAPVLNKPWSRGSVTLSAQAPQAQTVVEFDLLSDPRDLARITSAFRFTASLFGELGG
ICGTPYVLSDARNLSRLMRYNEPTSANAVRAAAAARLIDAMPGFGQRMVAKLSKMTPAAE
VLRSDDALADYARRSISGTGHVSGTCRMGAASDPLAVVDPHGRVHGMQGLYVADASVMPT
VPSANTHLPTIMVAEKIAQGLLV
Download sequence
Identical sequences F8GY90
gi|339323786|ref|YP_004682679.1| gi|339323786|ref|YP_004682679.1|NC_015724 WP_013954114.1.32076

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