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Domain assignment for gi|374333685|ref|YP_005086813.1|NC_016646 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374333685|ref|YP_005086813.1|NC_016646
Domain Number 1 Region: 465-492,532-779
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 3.66e-58
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0000804
Further Details:      
 
Weak hits

Sequence:  gi|374333685|ref|YP_005086813.1|NC_016646
Domain Number - Region: 242-415
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0353
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.012
Further Details:      
 
Domain Number - Region: 67-162
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0575
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|374333685|ref|YP_005086813.1|NC_016646
Sequence length 787
Comment methyl-accepting chemotaxis receptor/sensory transducer [Pseudovibrio sp. FO-BEG1 plasmid unnamed]
Sequence
MLSAAAGGIGIFSISQLTKQTDMTNATMRLMQGLHDTTSARETYLRSLSKYDATAAADEL
NLLGADLEALHEQVVADGKDGTAFEETHENVRALKGLFSRVRMATDIQESQIAKMMSAVA
NLQAIGKKVQADISKIATSAAEQDTLAKEQLKEADKAGRLVATIQSQALNMRYFFVKATT
SSEEGALRKTLLSAAKARREIKKLQKIELSHLDPKVLQSLADVSDTLVEKLKALRDSTDF
SEMYSLRQDITASIDVLGETAQLVIGFTYRSIDDANKKQAEAVDRKQQVDAALASVSNIT
RQTLAVSSSSLSFLRAGSGVKAEEVSKEIDQLGAAGREFKAGVKDIEGGVKASKDAMKEI
AAIRSGFGSMANGKKELASLVSKLTEQSETVQGQIIDIAASEAENASSAGELATNLIATT
VAVCLAFGALIALGLSLAITRPTKRLTGIMERLANGDTNVEIAGVKRRDEIGDMSRTVQV
FRDNALERARLREEQAHVAEKDAEKQREVEQLITDFRNTATNLLTSVNDSMGEMGETASV
MADLARGTSDQTERAAASSTDAANNVQMVSAAAEELSSSIEEIARQVSATTSVVAKATES
AHVSNDRINELADATVKIGEVVGLIQAIAEQTNLLALNATIEAARAGEAGKGFAVVAAEV
KELANQTSKATEEISSQISAIQNSTTDAVSSIEGISNTMDEVTAFTSAIATAVEQQGAAT
TEISRNVQEAAVGTSSVNENMSLVSEAVSETNTASSRVLTASTEVTESTRALGREVDDFL
TAVAKVG
Download sequence
Identical sequences G8PVQ8
gi|374333685|ref|YP_005086813.1| gi|374333685|ref|YP_005086813.1|NC_016646

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