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Home > Genomes > NCBI plasmid sequences > gi|389874807|ref|YP_006374163.1|NC_017958

Domain assignment for gi|389874807|ref|YP_006374163.1|NC_017958 from NCBI plasmid sequences

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Strong hits

Sequence:	gi\|389874807\|ref\|YP_006374163.1\|NC_017958
Domain Number 1	Region: 850-1013
Classification Level	Classification	E-value
Superfamily	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	2.1e-38
Family	Histidine kinase	0.002
Further Details:

Domain Number 2	Region: 1034-1154
Classification Level	Classification	E-value
Superfamily	CheY-like	1.1e-18
Family	CheY-related	0.0053
Further Details:

Domain Number 3	Region: 658-770
Classification Level	Classification	E-value
Superfamily	PYP-like sensor domain (PAS domain)	0.00000000000226
Family	Heme-binding PAS domain	0.026
Further Details:

Domain Number 4	Region: 786-860
Classification Level	Classification	E-value
Superfamily	Homodimeric domain of signal transducing histidine kinase	0.000000000569
Family	Homodimeric domain of signal transducing histidine kinase	0.0042
Further Details:

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Cellular Component	IC (bits)	H-Score

Molecular Function	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

External link(s)	gi\|389874807\|ref\|YP_006374163.1\|NC_017958
Sequence length	1160
Comment	two-component hybrid sensor and regulator [Tistrella mobilis KA081020-065 plasmid pTM3]
Sequence	MLALSLGYLAVLFAIAWQGDRVAARRGGTAARRAPLLYALSLAVYCTSWTFYGAIGRAAT GGFDFLSIYVGPILMIGLGWPILAKMVRVAKAENVVSISDFISARYGKSRVLAALVTAIA VVVVLPYFALQLKAITISFEALAGNPFAGTVMPDLPGRTTLLVTVIMAAFAILFGVRTIH ANEHHPGLMSAISAESLVKLAAALIVGAAITVVVAGGPVSLVGTALADPALAHMLEPRLG LSWWAMTLLSGFAILCLPRQFHVAVVENTHVGDIRTAAWLFPAYLIAINLFVVPVAMAGL LLFAGADVNADTFLVTVPLAMGEPGLALLAFIGGLSAATGMIVVGAVALSTMVCNDLIVP ALMALRPGSRRLRDNPTRMLLLARRLAVIGILALAYINYLLLGSTFPLVTFGLVSFAGVA QFAPPLLLGLFFRQVTKAGAIAGLVAGFAAWVATVLLPSFAEAGVVAGSLLHDLLLRPGW ISIDDITSVHDLDVLSGGALASLALNLVVLLAVSRFTRQSDLEARQAERFVSMRHELGER RVHPRGATLADLHELAARYVGRTRADAAFADLAQARNPHTDGFDAAPPLRIDQEAVQATE WLLAGAIGSASARVVVASLLADRRLSRSDARSIIDEASRAILDQHTLLRSTIENVGKGIC AFDRDFRILVWNRRFLDMLDVPESLITVGTPLSDIVDHLHARGEFSHDREIVTLLRRYDP DLRGRPDMYQRIRPDGTVLEVTSNPLPDGGFVAVFNDVTERHRAAEALREANEGLERGIA ERTADLADAKAEADRANRAKTRLLAAVSHDLLQPLHAARLFISAARDRGNDPLVGQADAA LRSVEQLLGDLLDITRLDTGVVKPSRGAVVVDEVLRPLIGEMVVVAARHGLKLVHVPCSV TVETDAVLLRRILQNLIGNALRYTRSGRVLVGCRQLGDRLRIEVHDTGPGIPPEKQAEIF QEFRQLDGGPGDRDKGLGLGLSIVERLAAILGHRVGLRSTPGRGSCFSVELPVSESRALA RRVAPETRGGGFDGTLVLCIENEPAIAEAMTALLGGWSCEVIWGTTAEAALSALGDRRPD IVLTDYHLDHGLSGLDVLAGLRTRFGADLPAAVITADRSDAVRRAAEAADCRIAYKPLRP GALRALIAHMVAKGRSRAAE
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Identical sequences	I3TWP3 gi\|389874807\|ref\|YP_006374163.1\| gi\|389874807\|ref\|YP_006374163.1\|NC_017958

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