SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|389879452|ref|YP_006381682.1|NC_017966 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|389879452|ref|YP_006381682.1|NC_017966
Domain Number 1 Region: 3-151
Classification Level Classification E-value
Superfamily CheY-like 3.84e-39
Family CheY-related 0.0003
Further Details:      
 
Domain Number 2 Region: 152-351
Classification Level Classification E-value
Superfamily HD-domain/PDEase-like 2.67e-34
Family HD domain 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|389879452|ref|YP_006381682.1|NC_017966
Sequence length 367
Comment two component system, transcriptional regulatory protein [Tistrella mobilis KA081020-065 plasmid pTM2]
Sequence
MTDRKTILLVDDTPSNLTIINAVLKDDYRTRIATGGAKALEIAAGPEGRPDLVLMDVMMP
GMDGYEVCRRLKADPATADIPVIFLTALHDERDERAGFAAGGVDFITKPFSPEIVRARVR
THLALREANARLARQNAELERRVDERTRELALVRDLTIFSLASLAETRDNETGNHIRRTQ
TYVRELALALRDHPRFRAELDDATIDLLYKSAPLHDIGKVGVPDAILLKPGRLTPEEFEV
MKQHAEFGRAAIAAAEARIGSGNGNSFLRYAREIAHTHHEKWDGSGYPRGLAGDAIPLSG
RLMAVADVYDALICKRIYKPAYSHETAVDIITQGRGTHFDPDIVDAFLTLADRFRDIAAE
FADPEEA
Download sequence
Identical sequences I3TTE9
gi|389879452|ref|YP_006381682.1|NC_017966 WP_014752790.1.78709 gi|389879452|ref|YP_006381682.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]