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Home > Genomes > NCBI plasmid sequences > gi|407723311|ref|YP_006842972.1|NC_018701

Domain assignment for gi|407723311|ref|YP_006842972.1|NC_018701 from NCBI plasmid sequences

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Strong hits

Sequence:	gi\|407723311\|ref\|YP_006842972.1\|NC_018701
Domain Number 1	Region: 419-720
Classification Level	Classification	E-value
Superfamily	Folate-binding domain	2.51e-100
Family	Aminomethyltransferase folate-binding domain	0.000014
Further Details:

Domain Number 2	Region: 9-224,327-412
Classification Level	Classification	E-value
Superfamily	FAD/NAD(P)-binding domain	5.5e-68
Family	FAD-linked reductases, N-terminal domain	0.0000427
Further Details:

Domain Number 3	Region: 224-326
Classification Level	Classification	E-value
Superfamily	FAD-linked reductases, C-terminal domain	9.81e-29
Family	L-aminoacid/polyamine oxidase	0.077
Further Details:

Domain Number 4	Region: 724-815
Classification Level	Classification	E-value
Superfamily	Aminomethyltransferase beta-barrel domain	1.96e-19
Family	Aminomethyltransferase beta-barrel domain	0.0017
Further Details:

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Cellular Component	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

Molecular Function	IC (bits)	H-Score

External link(s)	gi\|407723311\|ref\|YP_006842972.1\|NC_018701
Sequence length	825
Comment	Sarcosine dehydrogenase, mitochondrial [Sinorhizobium meliloti Rm41 plasmid pSYMB]
Sequence	MAQEFPTQARVVIIGGGIIGCSVAYHLTKLGWTDVVLLEQGQLSGGTTWHAAGLVGQLRS HANMTGLIRYSTQLYSELEAETGLATGWKNCGSLAVARTSDRMTVLKRTAASARAQGVAV EVISPREAADLWPVMAMDDLVGAVWLPGDGKANPTDLTQSLAKGARNHGARIIERVRVTG ITVKDGTVRGVETDRGDIAAEIVVNCAGQWARKVGLMCGVTVPLHSAEHMYIVTGKIEGV HPDLPVLRDPDGYIYFKEEVGGLVMGGFEPEAKPWGMNGIPDDFEFALLADDWGQFEILM QNALVRVPQLETTEVRKFYNGPESFTPDNNFILGEAPELRNFYVGAGFNSMGIASAGGAG RALAEWIVNGAPTMDLWPVDIRRFASFNNNPRWLHDRVKETLGLHYAMPWPNRELHTARP FRRSPLYDRLASKGACFGSKMGWERANWFAEAGQRSETDYAFGRQNWHEAVKREMNATRQ AAGIFDQTSFAKLLVQGRDAAKALNRICAADVDVGIGRSVYTGMLNERGGYESDLTVMRL AADRFLIVTGSAQAVHDADWIRRNTSPDAHVTLTDVTSAYAVLALMGPNARDILCRITSA DLSNAGFPFATIREIDIGYATAYANRMTYVGELGWELIVPSEFAVGVYEALHQAGRDLGL VDCGYYALEALRIEKGFRAWSRELTPDINPHEAGLAFAVSFDKPGGFIGREALMRAKHAG APVRRIVQFTLDDPEPMLWGGELILRDGKPVGEVRSAAYGHTLGLSVALGLIEDRGGVDR EFIASGSFEIDLAGERHPATAHLKCPYDPKSERVRADAGEPRAAA
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Identical sequences	gi\|407723311\|ref\|YP_006842972.1\|NC_018701 WP_015008265.1.3038 WP_015008265.1.34728 WP_015008265.1.96031 gi\|407723311\|ref\|YP_006842972.1\|

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