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Domain assignment for gi|543110847|ref|YP_008532255.1|NC_022344 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|543110847|ref|YP_008532255.1|NC_022344
Domain Number 1 Region: 359-662
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 8.28e-20
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|543110847|ref|YP_008532255.1|NC_022344
Sequence length 669
Comment methyl-accepting chemotaxis sensory transducer protein [Pseudomonas aeruginosa plasmid pOZ176]
Sequence
MSNNFSFVPLTAVLLIATGSAAAWTGYSFLKDTRADSFYVAETYELKSAAMQTIYLADKA
AADGAYASQLVEAESQVERALMHLRNGDPIKGIPGAPESVLRSLESLSASWDGIAPSIAK
LISGQSGTEAFSRSAKEAKTAVVKVIESGRSAEALLSKLNATSQQKSQLAQALTELEADV
AGVTATTVVDATGLQGAEAGVSKYLGALTAFGNSLPRDKAMMDELIKSYRSAQSAQSLIS
QASGLSANSAQNLPHAKEIWQARDKIASSTDTLIASVKALPDARAINPTLVAVLGALTIG
LAILSVLLVARVSASRAQAVETRGSTIEGSQRERSKELSLLLTEIERVGRGELDLTLTDD
RDSTKEIAKLLNQVFARFHEIFTETSQTVMGLAAATEQTITTARNVDRNRDEQFRAIEHI
SSLIADMNTFINLIQQLMGDTQRVANSVANKVHAGSESVNGVHEGILVQTQHLNSIQHRN
KHLIERFQMLERISEFVKEVATKSELVAYNAYLVSDQVEGNTELSRAMAKSGEAVQDLST
QSKAVVSEIGQLLKDMNEAARDTQTAVDISLSEMQGLLTRSNAALASLKDIQSITESLTT
SVDDVNQRTNSLISQSSEVSETMSSIRHYASENSAASEQTASAMNNLNRQAQNLHSGIQD
FYSKQRERA
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Identical sequences gi|543110847|ref|YP_008532255.1|NC_022344

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