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Domain assignment for gi|119387590|ref|YP_918624.1|NC_008688 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|119387590|ref|YP_918624.1|NC_008688
Domain Number 1 Region: 14-81
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 9.84e-20
Family LexA repressor, N-terminal DNA-binding domain 0.084
Further Details:      
 
Domain Number 2 Region: 97-220
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 1.36e-19
Family GntR ligand-binding domain-like 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|119387590|ref|YP_918624.1|NC_008688
Sequence length 232
Comment GntR family transcriptional regulator [Paracoccus denitrificans PD1222 plasmid 1]
Sequence
MAETETFPERRRGSGVKLVYDLLRDEILDLVLPPGSPIDEVQLAERFGMSRTPIREALVR
LAGEGLVETLPNRSTMVANIDFLNMHTFFDALTLMYRVTTRLAASYHQPADLEIIREHQA
RFTAAVEAQDALAMIASNRDLHAAIAEAGRNPYYLSLFLRLLDEGRRLLRLYYQSFNDRL
PREYVDEHEAMIAAIEARDVELCDRLAKAHADQIVRQIQQFLARDQRQSLPL
Download sequence
Identical sequences A1BBN4
gi|119387590|ref|YP_918624.1| WP_011751087.1.25907 WP_011751087.1.3707 WP_011751087.1.52749 318586.Pden_4868 gi|119387590|ref|YP_918624.1|NC_008688

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