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Domain assignment for gi|158341225|ref|YP_001522411.1|NC_009931 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  gi|158341225|ref|YP_001522411.1|NC_009931
Domain Number - Region: 286-300,333-379
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 0.0706
Family Intein (protein splicing domain) 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|158341225|ref|YP_001522411.1|NC_009931
Sequence length 404
Comment hypothetical protein AM1_F0107 [Acaryochloris marina MBIC11017 plasmid pREB6]
Sequence
MRIKGLLKASHQVRDQLKIGIPINEVPQFKQYVKDSIKVTEQICAKAKTSPNQLPLPSRK
AYKFLKSVDLKNLPIIQQCSTLQSQKRISIRQIRPQHQRLQRQIAEVANGSGLNSKQGQD
LVQQLQHTAQDIEVLCNRQVATPANLTGQSRQIYCWIKFLLSDDNLQSHLNAVQTFYQLL
QLGLEQKKPSDNTNWQQLKDPKNLSIEFAHISALYRCKLGTEQGSIKVNEGFILADELIL
EALVNSILNGKTPKTTSVFYEYSLSEEFAELLMEMELLVEDLNETAQGSTYNLEEVYQKV
NQAYFDGTLDKPKLCWSRTYSKRKFGHYEPSRDQVVISLNLDTKKVPRYVVEFVMYHELL
HKVHGHRTQNGRQMAHTPEFRRDERLFQKYLQAEEHLQRLARAS
Download sequence
Identical sequences A8ZQ88
gi|158341225|ref|YP_001522411.1|NC_009931 gi|158341225|ref|YP_001522411.1| 329726.AM1_F0107 WP_012168170.1.67183

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