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Domain assignment for gi|187935807|ref|YP_001893660.1|NC_010680 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|187935807|ref|YP_001893660.1|NC_010680
Domain Number 1 Region: 1-112,140-509
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 3.3e-168
Family Clostridium neurotoxins, catalytic domain 0.00014
Further Details:      
 
Domain Number 2 Region: 498-828
Classification Level Classification E-value
Superfamily Clostridium neurotoxins, "coiled-coil" domain 1.44e-117
Family Clostridium neurotoxins, "coiled-coil" domain 0.00037
Further Details:      
 
Domain Number 3 Region: 841-1022
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.14e-36
Family Clostridium neurotoxins, the second last domain 0.00099
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|187935807|ref|YP_001893660.1|NC_010680
Sequence length 1197
Comment botulinum neurotoxin type B, nontoxic-nonhemagglutinin component, NTNH [Clostridium botulinum B str. Eklund 17B (NRP) plasmid pCLL]
Sequence
MNINDNLSINSPVDNKNVVVVRARKTDTIFKAFKVAPNIWVAPERYYGESLSIDEEYKVD
GGIYDSNFLSQDSEKDKFLQAIITLLKRINSTNAGEKLLSLISTAIPFPYGYIGGGYYAP
NMITFGSAPKSNKKLNSLISSTIPFPYAGYRETNYLSSEDNKNFYASNIVIFGPGSNIVE
NNTVFYKKEDAENGMGTMTEIWFQPFLTYKYDQFYIDPAIELMKCLIKSLYFLYGIKPSD
DLVVPYRLRNELENIEYSQLNIVDLLVSGGIDPKFINTDPYWFIDNYFSNAKKVFEDHRN
IYKTEVEGNNAIGNDIKLRLKQKFRINTNDIWELNLNYFSKEFSIMMPDRFNNALKHFYR
KQYYKIDYPENYSINGFVNGQINAQLFLSDRNQDIINKPEEIINLLNGNNVSLMRSNIYG
DGLKSTVDDFYSNYKIPYNRAYEYHFNNSNDSSLDNVNTGVIDNIPEIIDVNPYKENCDK
FSPVQKITSTREINTNIPWPINYLQAQNTNNERFSLSSDFVEVVSSKDKSLVYSFLSNVM
FYLDSIKDNSPIDTDKEYYLWLREIFRNYSFDITATQEINTNCGINKVVAWFGKALNILN
TSDSFVEEFQNLGPSSLINKKENLSMPIIEIDEIPNYMLGLPLNDLNEKLFNIYLKNILY
FKKVYFNFLDQWWTEYYSQYFDLICMAKQSILAQEKLIKQIIQNKLQDLSKADISMDKLN
LMNLATGKTFIDLSNESQIAIDNINDFLNKSAICFFDTNIYPKFISFMEQCINSVNSNVT
TFIQKCTNITEDEKLQLIKLNTFMNIDFEFFDIQNIKDLITSETDLIKEEKESDYNLFLL
TLQEDNNKVIEDISGKNTLVKYSDSISLVYGVNGDALYLKEPNESVSFSNKVFENGLTNS
FSICFWLRNLGEDIITSKLIENKADNCGWEIYFENNGLVFSIVDCNGNEENIYLSDVISK
NWYYISISIDRLRNQLLIFINDKLIANQSIEQILNIYSSSTISLVNENNPIYVEGLSILN
RSITSEEVVNNYFSYLNNSYIRDISGERLEYNKIYELYNYVFPENSLYEVTENNNIYLSI
KDTNDLNIQGAKFKLINIDTNKQYVQKWDEGVVCLLGDEEKYVDISSENNRIQLVSSRDT
AKKIIFNNDIFKPNCLTFAYNNKYLSLSFRDRNYNWMIYNNNDNIPKAAHLWTLKGI
Download sequence
Identical sequences B2TSC3 Q45888
gi|187935807|ref|YP_001893660.1| 508765.CLL_0037 WP_012431075.1.45387 WP_012431075.1.55913 gi|187935807|ref|YP_001893660.1|NC_010680

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