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Domain assignment for PGOCHK00000094562 from Gallus gallus 58 (pseudogene)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PGOCHK00000094562
Domain Number 1 Region: 635-722
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.48e-23
Family Canonical RBD 0.0049
Further Details:      
 
Domain Number 2 Region: 2-449
Classification Level Classification E-value
Superfamily TPR-like 9.86e-21
Family HAT/Suf repeat 0.042
Further Details:      
 
Domain Number 3 Region: 536-624
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.28e-20
Family Canonical RBD 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: PGOCHK00000094562
Sequence length 801
Sequence
KLSINAFDYNCHLDLIKLLRQEGELVKLRRARQKMSELFPLTEEIWLDWLKDEIKMASXX
XLWYLSIQESIRFACLGGPRNDAHILFVQKYSXSLQLGLSVSMVHSLRSFKEXNYKQKHE
HVRIKQRLNSDYLAXVHXXWDFVSVLPDMEASYAEYEEWSEDPIPETTIKNYKKALQQLE
KCKPYEEALLGAETPKLAEYQAYIDFEMKAGDPARIQLIYERALAENCLVPDLWARYNQY
LDRQLKVKELVLSAHDRAVRNCPWTVGLWIQYLLAMERHGVDHCIISGKERXSQQNFFAV
QNCLLCSKXFLKLMKFTVVCFXGTAVLVEQLHFXASASLQLCLNXXXXDNRMAXRECQKM
LTWGGSIITWKLETLQQQSIVXASWGWRCFLCCRAHGDTQHCRKALHRAVQCTSDYPEHV
CEVLLTLERIEGTLEDWDAAVQKTENRLARVNEQRAKLRRKPSKLNKENMSFQFHSSAEQ
PSKRHKGDGDGLLLEEEMELETGLFGRSGPEKPDHPTNQKEKPSTSRKDVPKVLHDSSKD
NITVFVSNLSYNMTDPEVKLKELFESCGEVSQVRPVFSNKGTFRGYCYVEFKDEKSALQA
LGMDRKVVEGRPMFVSPCVDKNKNPDFKVFRYSTTLEKHKLFISGLPFSCTKEELEDICK
AHGNVKDIRLVTNRAGKPKGLAYVEYENEAQASQAVLKMDGLTIKEHVIKVAISNPPLRK
LPDKAEAGRASQFAVPRQIYGARGKGRTQLSMMPRALQRQSNPVAKAENGMVQNSPATSS
ERTEEPKKMSNADFAKMLLNK
Download sequence
Identical sequences PGOCHK00000094562

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