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Domain assignment for POPTR_0003s20280.1|PACid:18217975 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0003s20280.1|PACid:18217975
Domain Number 1 Region: 116-233,333-444,802-1022
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 4.97e-112
Family Calcium ATPase, transmembrane domain M 0.0013
Further Details:      
 
Domain Number 2 Region: 449-468,606-866
Classification Level Classification E-value
Superfamily HAD-like 2.11e-53
Family Meta-cation ATPase, catalytic domain P 0.00019
Further Details:      
 
Domain Number 3 Region: 456-661
Classification Level Classification E-value
Superfamily Metal cation-transporting ATPase, ATP-binding domain N 3.49e-48
Family Metal cation-transporting ATPase, ATP-binding domain N 0.0032
Further Details:      
 
Domain Number 4 Region: 234-328
Classification Level Classification E-value
Superfamily Calcium ATPase, transduction domain A 1.57e-24
Family Calcium ATPase, transduction domain A 0.00082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0003s20280.1|PACid:18217975
Sequence length 1047
Sequence
MEQYLKENFVVDAKRPSEQALRRWRSAVSVVRNPRRRFRMVADLAKRAEAERKRKNLQEK
IRIALYVNKAALHFIEAAKVVEHKLSDNVRQTGFGIGPDELAALARSHDINDLESHGGVE
GLAREVSASLNDGVVSSDISLRQNIYGFNRYAEKPARSFWMFVWDALHDLTLVILMVCAV
VSIGVGIATDGWPNGMYDGVGIVICILLVVMVTAITDYKQALQFKVLDKEKKNVIVQVTR
EGIRQKVSIFDLVVGDVVHLSIGDLVPADGILISGHSLSVDESSLSGESELVDINKKRPF
LLSGTKIQDGSGKMLVTAVGMRTEWGTLMVHLSEVDQDETPLQVKLNGVATIIGKIGLAF
AVITFLVLLVRFLLVKADHHEITKWSSSDALKLLNFFSISVTIIVVAVPEGLPLAVTLSL
AFAMKKLMHDRALVRHLSACETMGSVCCICTDKTGTLTTNHMVVNKIWICEETKSIQTNS
NKDLLMSSFSENVHGILLQSIFQNTGSEVTKGKDGRDNILGTPTETAILEFGLILGGEFK
TYHNESEIVKVEPFNSEKKKMSVLVSLPNNGGFRAFCKGASEIILKMCDKMLTADGKAVP
LSEKQRQKITDVINGFACEALRTLCLAFKDMENTSGANSMPDNNYTLIAVVGIKDPIRPE
VKEAVKTCLDAGITVRMVTGDNINTAKAIARECGILTDYGLVIEGADFRCKSPQELEEII
PNLQVMARSSPSDKHKLVTQLRSVFKEVVAVTGDGTNDAPALAEADIGLAMGIAGTEVAK
ESADVIVMDDNFKTIVNVARWGRSVYINIQKFVQFQLTVNVAALMINFISAIRLSLNSPF
QDACDEPLTTVQLLWVNLIMDTLGALALATEPPHDGLMKRPPIGRNVNIITKTMWRNIIG
QSIYQISVLVILQLDGKHLLKLSDSDDTKILNTFIFNTFVLCQVFNEINSRDMEKINVFK
GIFSSWIFLAVMFSTVTFQIVIVEFLGTYANTVPLRWELWLASVLIGAASLVISVILKCI
PVGTNKDDNTAKHHDGYEPLPSGPDMA
Download sequence
Identical sequences B9GWB2
3694.fgenesh4_pg.C_LG_III001640 XP_002304770.1.11743 POPTR_0003s20280.1|PACid:18217975

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