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Domain assignment for POPTR_0003s20380.1|PACid:18217691 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0003s20380.1|PACid:18217691
Domain Number 1 Region: 292-311,357-591
Classification Level Classification E-value
Superfamily HAD-like 7.15e-48
Family Meta-cation ATPase, catalytic domain P 0.00023
Further Details:      
 
Domain Number 2 Region: 134-220
Classification Level Classification E-value
Superfamily Calcium ATPase, transduction domain A 1.23e-20
Family Calcium ATPase, transduction domain A 0.0069
Further Details:      
 
Weak hits

Sequence:  POPTR_0003s20380.1|PACid:18217691
Domain Number - Region: 239-285
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 0.0114
Family Calcium ATPase, transmembrane domain M 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) POPTR_0003s20380.1|PACid:18217691
Sequence length 593
Sequence
FSMVLPMLPSYGNWLDYKMLTIGRLLRWILCTPVQLIFGQRFYVGAFQALRRRYANMDVL
IALGTNAAYFYSIYTVIKALTSDRFEGQDFFETRKYLEVVAKGKTSDAIAKLINLPPDTA
YLLILDTAGNVTSEMEISTKLIQRHDIIKIFPGAKAPVDGIVVSGQSYLNESMITGKARP
VAKEAGDKVIGGTLNENGYLLAKATHVGSDTTLSQIVRIVETAQLARAPAQKLADQISIY
IFRSHMLVVACPCALGLATPTAIIVATGKGASQGVLIKGGNALEKAHKVTAVVFDKTGTL
TVGKPAVVSDVLFSSISLEDFCDAVISVEAYSEHPLAKAVVEHAKWLWQKHGSSREQVTE
VRDFEVHPGTGVSGKVGDRRVLVGNKRLMNALNQFARTSILVAIDGKVAGAFSVTDVMRP
EAQLAASFLRSLGISSIMTKGDNWAAATAIAKEVGIEDVYAEIDPLGKAAKIKELQMKGM
NVAMVGDGINDSPALLVADVGMEIGAGTDVAIEAADIALIRSNLEDVVSAIDLSRKTISR
IRINYFWALGYNRISLPIAAGILYPFTGIRLPPWLAGACMAASSLSTVCSSLL
Download sequence
Identical sequences U5GN67
XP_006386024.1.11743 POPTR_0003s20380.1|PACid:18217691

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