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Domain assignment for POPTR_0006s10970.1|PACid:18211818 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0006s10970.1|PACid:18211818
Domain Number 1 Region: 186-274,416-553,1048-1266
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 1.26e-53
Family Calcium ATPase, transmembrane domain M 0.03
Further Details:      
 
Domain Number 2 Region: 554-570,839-1045
Classification Level Classification E-value
Superfamily HAD-like 4.06e-38
Family Meta-cation ATPase, catalytic domain P 0.04
Further Details:      
 
Domain Number 3 Region: 565-595,633-845
Classification Level Classification E-value
Superfamily Metal cation-transporting ATPase, ATP-binding domain N 3.05e-17
Family Metal cation-transporting ATPase, ATP-binding domain N 0.013
Further Details:      
 
Domain Number 4 Region: 270-341,374-411
Classification Level Classification E-value
Superfamily Calcium ATPase, transduction domain A 7.32e-17
Family Calcium ATPase, transduction domain A 0.0095
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0006s10970.1|PACid:18211818
Sequence length 1294
Sequence
MTSGWPLLLSLDNSPVSEQPLPHHSGSFSALGVSRRDCSFNTSILHLAQGEPFEVDCSEK
DEGRAHFFGDTRFRSVNPVVESFDLVVNTKRLYSLKSEFFEEVPLECPKQRSKHLVWWGA
TASEMLHNNNNTTFSTGFEISRDCGNLGKPKGRSRRRSVQFDDVLREEDARFIYINDPRR
TNDQYEFTGNEIRTSKYTLITFLPKNIFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSL
FPLLFVLCVTAIKDGYEDWRRHRSDRNENNREALVLQCGQFRSKKWKKIRAGEVVKICTD
ETIPCDMVLLGTSDPSGVAYIQTMNLDGESNLKTRYARQETSLAVLEGGAISGLIRCEQP
NRNIYEFTANMEFNGQKFSLSQSNIVLRGCQLKNTGWIIGVVVYAGQETKAMLNSAASPS
KRSKLEIYMNRETLWLSIFLFIMCLVVAVGMGLWLARYEDQLDYLPYYRKRYFTPGKVYG
KRYKFYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRIGQSYFMIGDRHMFDSSSGSR
FQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVNGKSYGGSSLTAEQLLEENISA
ATTQKRWKLKSTITVDSELLKLLHKDLVGDERIVAHEFFLALAACNTVIPVRTHDGFSSC
TDSQIFEDVETIDYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLGVLGMH
EFDSVRKRMSVVIRYPNDAVKVLVKGADSSVLSILAKDLGKDDHARRSATYSHLTEYSSQ
GLRTLVIAARDLTEEELELWQCRFDDASTSLTDRAARLRQTAALIECDLNLLGATAIEDK
LQEGVPEAIESLRQAGIKVWVLTGDKQETAMSIGLSCKLLTPDMEQIIINGNSENDCRKL
LSDAKAKCGLNLSNKGSQYLKCNAEMDYLQRPERKEEVPLALIIDGNSLVYILEKELESE
LFDIATYCKVVLCCRVAPLQKAGIVDLIKSRSDDMTLAIGDGANDVSMIQMADVGVGICG
QEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLILYNFYRNAVFVLMLFWYILFT
AFSTTSALTDWSSVLYSVIYTSVPTIVVGILDKDLSHRTLLQYPKLYGVGYRHEAYNIRL
FWVMMADTLWQSLVLFGIPIFIYKESTIDIWSIGNLWTVAVVILVNIHLAMDVQRWVSIT
HLAVWGSVIVAFACVVVLDSIPIFPNYGTIYHLTKSPTYWLTIFLIIVSALLPRFLLKLV
HHHFWPSDIQIAREAEILGRGPDYWGSKPVGSSS
Download sequence
Identical sequences B9HDJ5
POPTR_0006s10970.1|PACid:18211818 XP_002309187.2.11743

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