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Domain assignment for POPTR_0006s27230.1|PACid:18213176 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0006s27230.1|PACid:18213176
Domain Number 1 Region: 3-118
Classification Level Classification E-value
Superfamily SNARE-like 5.95e-31
Family Synatpobrevin N-terminal domain 0.012
Further Details:      
 
Domain Number 2 Region: 120-187
Classification Level Classification E-value
Superfamily SNARE fusion complex 6.8e-21
Family SNARE fusion complex 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0006s27230.1|PACid:18213176
Sequence length 220
Sequence
MAILYALVARGSVVLAEFSSTATNASAIARQILDKIPGNDDSNVSYSQDRYIFHVKRTDG
LAVLCMADETAGRRIPFAFLEDIHQRFARTYGRAVITAQAYAMNDEFSRVLSQQMEYYTN
DPNADRINRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFS
SAVWWRNVKLTVALILLLLVIIYVVLAVVCHGVTLPTCRK
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Identical sequences A9PGC9
3694.fgenesh4_pm.C_LG_VI000807 XP_002308673.1.11743 POPTR_0006s27230.1|PACid:18213176

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