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Domain assignment for POPTR_0008s01500.1|PACid:18249078 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0008s01500.1|PACid:18249078
Domain Number 1 Region: 65-153,295-430,902-1119
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 1.57e-51
Family Calcium ATPase, transmembrane domain M 0.023
Further Details:      
 
Domain Number 2 Region: 688-753,796-901
Classification Level Classification E-value
Superfamily HAD-like 2.11e-31
Family Meta-cation ATPase, catalytic domain P 0.061
Further Details:      
 
Domain Number 3 Region: 442-458,506-706
Classification Level Classification E-value
Superfamily Metal cation-transporting ATPase, ATP-binding domain N 8.28e-19
Family Metal cation-transporting ATPase, ATP-binding domain N 0.0097
Further Details:      
 
Domain Number 4 Region: 149-220,253-290
Classification Level Classification E-value
Superfamily Calcium ATPase, transduction domain A 2.48e-16
Family Calcium ATPase, transduction domain A 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) POPTR_0008s01500.1|PACid:18249078
Sequence length 1154
Sequence
MDSQNPFEEEISLNQRKGGNSVREVRHGSRGGDIELLGLSQKEIGDDDARLVYLNDPVKS
NERYEFAGNSIRTSKYSVFSFLPRNLFRQFHRVAYIYFLIIAVLNQLPQLAVFGRGASIM
PLAFVLSVTAVKDAYEDWRRHRSDRVENNRLAWVLVDDEFRQKKWKDIQVGEILKIQANE
TFPCDIVLLSTSEPTGVAFVQTVNLDGESNLKTRYAKQETISKIPGEEMINGLIKCERPN
RNIYGFQANMEVDGKRLSLGPSNILLRGCELKNTAWAIGVAVYCGRETKAMLNSSGAPSK
RSQLETHMNFETIILSLFLIFLCSVVSICAAVWLRRRKDELDILPFYRRKDFAHGAPQNF
NYYGWGLEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDMLLYDEGSNSRFQC
RSLNINEDLGQIKYVFSDKTGTLTENKMEFQRASIWGVDYSDGRTVSRNDPAQAVDGKIL
QPKMEVKVDPQLLELSRSGKDTKGAKHVHDFLLALAACNTIVPLVVDDTSDSTVKLLDYQ
GESPDEQALAYAAAAYGFMLTERTSGHIVINIQGERQRFNVLGLHEFDSDRKRMSVILGC
PDKTVKVFVKGADTSMFSVIDRSLNTNIIHATEAHLQTYSSMGLRTLVFGIRELNNSEFE
QWHLTFEAASTAIIGRAALLRKVANNVENSLTILGASAIEDKLQQGVPEAIESLRTAGIK
AWVLTGDKQETAISIGYSSKLLTSKMTSIIINSNSKQSSRKSLEDALVASKKLTITSGIT
HNTGASDAAAVNPVALIIDGTSLVHILDSELEELLFELASKCSVVLCCRVAPLQKAGIVA
LVKNRTRDMTLAIGDGANDVSMIQMADVGVGISGREGQQAVMASDFAMGQFRFLVPLLLV
HGHWNYQRMGYMILYNFYRNAVFVLVLFWYVIFTSFTLTTAITEWSSMLYSIIYTALPTI
VVGILDKDLSRRTLLKYPQLYGAGHRQEAYNSKLFWLTMIDTLWQSVAVFSIPLFAYWAS
SIDGSSIGDLWTLAVVILVNLHLAMDIFRWSWITHAVLWGSIIATFICVIVIDAVPIFTG
YWAIFHVAKTELFWLCLLAIVLAALIPRYVVKFLYQYYSPCDIQIAREAEKFGSPREPRN
TKIETNPILGSPHR
Download sequence
Identical sequences B9HKJ8
POPTR_0008s01500.1|PACid:18249078 3694.estExt_fgenesh4_pg.C_LG_VIII0122 XP_002311927.1.11743

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