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Domain assignment for POPTR_0008s11060.1|PACid:18248901 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0008s11060.1|PACid:18248901
Domain Number 1 Region: 51-142,287-330,359-419,908-1137
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 8.11e-52
Family Calcium ATPase, transmembrane domain M 0.023
Further Details:      
 
Domain Number 2 Region: 413-437,646-766,833-903
Classification Level Classification E-value
Superfamily HAD-like 1.46e-31
Family Meta-cation ATPase, catalytic domain P 0.07
Further Details:      
 
Domain Number 3 Region: 494-663
Classification Level Classification E-value
Superfamily Metal cation-transporting ATPase, ATP-binding domain N 6.1e-22
Family Metal cation-transporting ATPase, ATP-binding domain N 0.0075
Further Details:      
 
Domain Number 4 Region: 144-210,245-285
Classification Level Classification E-value
Superfamily Calcium ATPase, transduction domain A 2.35e-16
Family Calcium ATPase, transduction domain A 0.0095
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) POPTR_0008s11060.1|PACid:18248901
Sequence length 1194
Sequence
MAGGGKRKRLRLSKLYSFACGKTSLKGDQSQMGSPGFSRVVHCNEPDCFEAKIRKYSSNY
VSTTKYNVATFLPKSLFEQFRRVANFYFLVVGVLAFTPLAPYTAVSAIFPLIVVVGATMV
KEGIEDWKRAQQDIEMNSRKTRLHQGDGTFKSTGWKNLRVGDIVKVKKDEYFPADLLLLS
STYDDGICYVETMNLDGETNLKLKQALESTAFMHEDSYYRDFKALIKCEDPNTNLYSFVG
TLDFEQNLYPLSPQRLLLRDSKLRNTEYIYGAVIFTGHDTKVMQNSTAPPSKRSKFEKQM
DKIVYFLFFVLFMMAFIGSLVFGVATDNDLDGQRMKRWYLKPDESTIYFDPKRVVMASLY
HFLTALMLYNYFIPISLYVSIEVVKVFQSSFINNDINLYYEPSDRPAHSRTSNLNEELGQ
VDTILSDKTGTLTCNSMEFIKCSVAGTAYGHGVTEAERGMAMREGESVNGWDQSKDSSST
KPHVKGFNFKDERIMDGKWVHEPQAHIIEKFFRLLAICHTAIPDVDEETGKISYEAESPD
EAAFVIAAREIGFEFYKRTQTSVAVREYNPETGRKVERVYTVLNVLEFNSARKRMSVIVR
NEEGKLLLLSKGADSVMFERLAKSGRKFEEETRNHVNDYADSGLRTLILAYRELDEEEYR
IFNQKFTEAKNSVNADRESLIDEVAEKVERNLILLGATAVEDKLQEGVPACIDKLAQAGI
KIWVLTGDKMETAINIGFSCCLLRQGMKQIIINLENPEILSLEKTGDKDTIAKASRENVL
RQITDGKALLTGPSGTAEIFALIIDGKSLAYALEDDMKHLFLDLAMSCASVICCRSSPKQ
KALVTRLVKIGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAAMASDVAIAQFRYL
ERLLLVHGHWCYRRLSSMICYFFYKNIAFGFSIWLYEAYTSFSAQSVYSDWFLSFYNVFF
TALPVAALGIFEQDVSAASCLKYPLLYQEGVKNLLFGWRRVLHWLGNGFYTAMVVFFFCT
SALQHQAFTRDGKTVGMEVLGGTMYTCIVWAVNLQMALSVCYFTKIQRGLIIYCLCMLYI
FFLAFGSLSPSMSKTAYKLFTEALAPAASYWFTIIFVIIAALLPFYAYSAIETRFFPMYH
QMIQRLESGKHEDDPEYCDMMRQRLLRPPTSVGFSARLAARANKLRRKNKNQPR
Download sequence
Identical sequences B9HIU2
3694.estExt_Genewise1_v1.C_LG_VIII2173 XP_002311411.1.11743 POPTR_0008s11060.1|PACid:18248901

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