SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for POPTR_0009s03680.1|PACid:18228369 from Populus trichocarpa v156

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  POPTR_0009s03680.1|PACid:18228369
Domain Number 1 Region: 74-374
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 4.05e-78
Family Protein kinases, catalytic subunit 0.00012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0009s03680.1|PACid:18228369
Sequence length 450
Sequence
MKCFHFSNGERREDEDAPVSKVSRVSWARSLSVASSSLDTRRSELDSDSYCYSSRDLSDS
VGLFELLSQRRANDLRVFGFSELKSATRGFSRGLLIGEGGFGCVYRGVVKVPADHESGSK
MDVAIKQLNRHGFQGHREWINEVNFLGVVKHPNLVKLVGYCAEDDERGIQRLLVYELMHN
KSLEDHLLARVLPITLPWMTRLKIAQDAARGLAYLHEEMDFQLIFRDFKASNVLLDSDFN
AKLSDFGLARQGPPEGLGHVSTSVVGTVGYAAPEYVQTGRLTAKSDVWSFGVVMYELITG
RRAVERNLPRGEQKLLEWVKPFVSDSKKFHLIVDPRLEGQCCIKSAQKLAALANRCLAKQ
PKSRPKMSEAVEILGNIISETSSQDEGIPEPVSEIEEVKEEATGETGAESTKPGNSYRKK
VFYIREMVNLRNRSTGKLDWRNWTPRLVRT
Download sequence
Identical sequences B9HPG9
POPTR_0009s03680.1|PACid:18228369 XP_002313435.2.11743

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]