SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for POPTR_0011s01540.1|PACid:18232304 from Populus trichocarpa v156

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  POPTR_0011s01540.1|PACid:18232304
Domain Number 1 Region: 384-655
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 5.62e-63
Family Protein kinases, catalytic subunit 0.0002
Further Details:      
 
Domain Number 2 Region: 28-239
Classification Level Classification E-value
Superfamily L domain-like 4.21e-35
Family Polygalacturonase inhibiting protein PGIP 0.005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) POPTR_0011s01540.1|PACid:18232304
Sequence length 689
Sequence
MALKHFELLLFVFVVKVLIFGFPVLVQCTTDANDVQALQSMYSSLNSPSQLTSWKSIGGD
PCGESWKGITCEGSAVVSVQISGLGLDGTMGYMLSNLMSLRTFDLSDNNIHDPLPYQLPP
NLTSLNLAINNLSGNLPYSISTMVSLSYLNVSRNSLSQSIGDVFHNLSLLSTMDVSFNNL
SGDIPSSFSSLSNLSTLNVQNNQLTGSLNVLTGLPLTTLNVANNNLSGWIPQELSSIPNF
IYNGNSFDNGPAPPPPPYTSPPSGKSHRNRTHPGSGAPRTSSSDGQPSESDKGISVGAIV
GVALGSVVLVLIALLALVFCIKKHQGKEIDPLASRGSRPADTYYTGAEMQEPRVKNMAAV
TDLKPPPAEKLVAERLLGNSGSIKRMKSPITATSYSVASLQTATNSFSQEFIIGEGSLGR
VYRGDFPHGKIMAVKKIDNAALSLQEEDNFLEAVSNMSHLRHPNIVSLVGYCVEHGQRLL
VYEYIANGSLHDILHFADDGSKTLSWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAI
VSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWA
TPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ
RASVVKRRPSDDSGFAYKTPDHEAIDSAF
Download sequence
Identical sequences B9HZA9
XP_002316561.2.11743 POPTR_0011s01540.1|PACid:18232304

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]