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Domain assignment for POPTR_0013s05960.1|PACid:18220921 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0013s05960.1|PACid:18220921
Domain Number 1 Region: 110-222,323-441,797-887
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 9.42e-93
Family Calcium ATPase, transmembrane domain M 0.00066
Further Details:      
 
Domain Number 2 Region: 445-465,595-852
Classification Level Classification E-value
Superfamily HAD-like 7.91e-54
Family Meta-cation ATPase, catalytic domain P 0.00031
Further Details:      
 
Domain Number 3 Region: 454-644
Classification Level Classification E-value
Superfamily Metal cation-transporting ATPase, ATP-binding domain N 2.19e-35
Family Metal cation-transporting ATPase, ATP-binding domain N 0.0049
Further Details:      
 
Domain Number 4 Region: 223-321
Classification Level Classification E-value
Superfamily Calcium ATPase, transduction domain A 9.68e-26
Family Calcium ATPase, transduction domain A 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0013s05960.1|PACid:18220921
Sequence length 888
Sequence
MTMRSRKTSDKITLDQEDLIPEPKRNQKRWRIAYTAIYFTRLLVSLSKKALVSQTKILRS
LSYVAVDVHDDTFQHENKLFSLINVDQRTLNDIIKEKNLESLNQLGGVIQVATILETDVK
DGTREADAAFRRDVFGANRFNKPPSKSFLSFVLEACKDPTIIILLVCAIMSLVFGIKQHG
LKNGWYDGGSIIVAVVLVIAVSAISNFKQSKQFEKLSDESRDITVQVVRDGRHNHISIFD
VVVGDVVSLKIGDQIPADGLFLHGYSLKVDESSMTGESDHVEVNGSENPFLLSGTKVTDG
FGFMLVTSVGMNTAWGEMMSSISRDLDEQTPLQARLNKLTSYIGKVGLTVAILVLAVMMI
RYFTGNTRDDNGRKEYYGSKTKVSDVLDSVVSIIAAAVTIVVVAIPEGLPLAVTLTLAYS
MKKMMKDNAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFCLGKETVEDNTEIESE
VYQLLQEGVALNTTGTVNSHANLVPEIIGSPTEKAILSWAVMDLGMDINETKGKCEIIHV
ETFNSEKKRSGVLMRKNSEKAIHTHWKGAAEMILAMCSNYYVRNGELRDLNDEEKVQFGA
IIQSMAAKSLRCIAFAHKKVVEENSQASAKLEENGMTFMGLVGLKDPCRIGVKTAVESCK
NAGVNVKMITGDNMHTARAIAIECGILNPEQDMKNGAVVEGVQFRNYSPEERMAKIDNIL
VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDI
VILDDNFTSVVTVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSSGKIPLTAVQLL
WVNLIMDTLGALALATEQPTNDLMTRPPVGRSDPLITKIMWRNLLAQA
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Identical sequences U5FRR0
POPTR_0013s05960.1|PACid:18220921 XP_006375913.1.11743

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