SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|121916067|gb|EAY20850.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|121916067|gb|EAY20850.1|
Domain Number 1 Region: 742-1110
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 9.42e-78
Family Formin homology 2 domain (FH2 domain) 0.0000402
Further Details:      
 
Domain Number 2 Region: 42-389
Classification Level Classification E-value
Superfamily ARM repeat 2.53e-48
Family Diap1 N-terninal region-like 0.0029
Further Details:      
 
Weak hits

Sequence:  gi|121916067|gb|EAY20850.1|
Domain Number - Region: 669-733
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 0.0017
Family beta-sandwich domain of Sec23/24 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|121916067|gb|EAY20850.1|
Sequence length 1189
Comment Formin Homology 2 Domain containing protein [Trichomonas vaginalis G3]
Sequence
MEQEGIPKYINAQGKVEFEYFLTSPPPQMPTLPDGKMDEEKVLEMFNDTITEMDIHGEKR
KPLEAKPIEQKWNFVLLQNQLNRQLPAPEYLIKVLKAHDVVQGANKERLSAILDKLSVQL
KSSILSWSTRFFNANGHLTLLSILSKKVACLNGYDSLVREDADSLINVLVCFRAICNSNS
GVKLMLNYPNAFPLFVNSIYPDLPRTIETALQILVVLILKEEDPVKAERNLRNIMKAFQN
LKRSHHGWKILAAAVKKELQSGSAALLLSSIVTFITGLYAALTDYPSFRTDWLLAIQQCG
LYSVLGEVSKEQYPNLPKLLNTMEIELRTIKTLFQKQVVNPYNQKAIVKKLYEASDPKYI
VPSILLQMLDTAFKNPSLFKGITTFIHNFLAIARAQNQGNGTQRLMQAIAIAQDLRVPIK
LRHLNPDVEPSELMTMYMFQTSEEMEQQPIMELVSEAAQSKVAANLQKMTEGDQSAPETP
QVSANASSSEIQKLIADYENKLITANQQIEGLKYSAKSAIENKEKESQRADAEAQKVIEL
EKKLKALEAQPKESADTKELIEYKQQAEEILSTLRSQIATLTAEKESLLGMLNAAKAAMD
SGEKIEIDMSSISASPANGDLKSQIEAKDAEIAKLKADYEQVKAELEKTKQELAAAHAGG
APAAPGLVPPPPPPPGGVPPPPPPPGGVPPPPPPPGGVPPPPAPPGVPAPPGVPAPPGAP
APPAPGLPKKPSPAPPVKTKAIFWTKIQDAQYENTIWKSIDDSKVSLNKDMLCELFAAAE
PAKKEKDPDAAPKKEKPKFVEIIDQQRAKSISIMLGRIRSPINEIANMIKNLDQNLSEDA
IGSLKNNVPTPDEIGSVEAYDGDMSLLGPPEQYVLAVSKIPMLQQHVEFLALRQSFEESM
NDIEVPVEILSTGFKQLKSSKKLKDLLQYILAIGNFINGGTNKGGAYGFKFDFFTKILDQ
RTNRPGYTLLNYIAETFDVATLCEELSGINKMLSVDFDTTKQNYNKLNGQVNGLSNQVGA
AEKLVVEGYMLAPTFMKFKESIEPRLAKPPAAIEQIAKDYEELVKLYGEDIAKTKMAEFL
EVFVNLVNGLRQADEANKKREQDEKKAAERAAKAAARGGPGARLPGMVMGGPGGAERGVL
DELMNSLREGPIALRKTPKPGAVAVQPAQPEMSDLQKRLAARRAKMGGD
Download sequence
Identical sequences A2DFC2
95394.m00365 5722.A2DFC2 XP_001581836.1.43485 gi|121916067|gb|EAY20850.1| gi|154417633|ref|XP_001581836.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]