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Domain assignment for gi|123426908|ref|XP_001307139.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|123426908|ref|XP_001307139.1|
Domain Number 1 Region: 61-200
Classification Level Classification E-value
Superfamily Ribonuclease H-like 8.35e-16
Family Retroviral integrase, catalytic domain 0.017
Further Details:      
 
Weak hits

Sequence:  gi|123426908|ref|XP_001307139.1|
Domain Number - Region: 300-329
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.0572
Family Tudor domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|123426908|ref|XP_001307139.1|
Sequence length 358
Comment Integrase core domain containing protein [Trichomonas vaginalis G3]
Sequence
MSLKEVFESSPWRSFKKFYEAAKNAGFNDRTEIKRFYDENIVHQVKVNPYDYYLPIYSKT
HDAYQFDTLVQSKKGRKPPFLIFINVNTRKAFAYIMKNKGTKEVLRVLQTFVAEHHPTSL
TSNQDSAYLSNEITEFLIKHNVTHYTTEDHNHNILGIINRFIRTLRDLNKERDFTEESMN
KVINAYNKSTHNSTGFKPNEMTSKEEDEYIKQKRMLTEERRSSSLLPGTKVRIILEHKPN
EKVRNQLSDDYYIVDSSQGNSYLIKAADHSVAFYPRFRLVESENGRLAKTVDEAKRGIVN
KIVSYDEDKDEYTVIYEGGVDDKIPSRNLRESNPTHLSELEKDYWKDKNKPKLIKKFL
Download sequence
Identical sequences A2FLJ5
92775.m00074 5722.A2FLJ5 gi|121888751|gb|EAX94209.1| gi|123426908|ref|XP_001307139.1| XP_001307139.1.43485

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