SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|123434767|ref|XP_001308850.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|123434767|ref|XP_001308850.1|
Domain Number 1 Region: 187-463
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 8.09e-75
Family Protein kinases, catalytic subunit 0.000034
Further Details:      
 
Weak hits

Sequence:  gi|123434767|ref|XP_001308850.1|
Domain Number - Region: 433-708
Classification Level Classification E-value
Superfamily ARM repeat 0.000356
Family GUN4-associated domain 0.078
Further Details:      
 
Domain Number - Region: 52-98
Classification Level Classification E-value
Superfamily Collagen-binding domain 0.0107
Family Collagen-binding domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|123434767|ref|XP_001308850.1|
Sequence length 790
Comment TKL family protein kinase [Trichomonas vaginalis G3]
Sequence
MQQPTLEAAAAQFRFVCSTIENAVQQAVAHRRKFKLAVSQFRQFTDHFMTVANKTMMTRD
QYDAYRFVVSDAYKTYIELFKQNTLQSWAQTALENQSSSVPSELCTLTSSLAEKTVVLDP
DGSQFFNSTSSQWIQLHILDLRAIETSFQQFLITPNQDPTVIEFVNTRLQSINAFLNQYS
QTEAATSGLAVFSPIPLNYQNWRVKHSDLLYEKEIGSGVSAVVYSGYYTPTNELVAIKKL
KYEKLTGPQLQAFQRELSILATAVHPTILKFIGATDTHPFCVVTQFMPGGTLYYDLHQRH
SLDPTDLTIALYDVARGMKFLHAQNIIHRDLKTLNVLIDDKKRAKLSDFGFSKQMDSNQL
MTMNVGTPHWMAPELLANNGPQTPGAQYDTKVDVYAFAIVMWEALVKEIPYHGMEPMQIV
AQVMMNDLRPHIPKDTPPAFEDLMKQCWARNPTMRPNFAEIVRKFRSGKISLPGCNMDIF
MKYVKEQQVQDNEEAQQQATETLQSCMSLMSDDPNRLEHFSTFVETIETDGIPPDQVESC
WIVLNERGCRGGAWFVRGLLTFLFTSRGVDAAKKLRTLDDIQPEQVSKILSLIPTGDEVV
DECLIVAVCKNGAAHQVLALPIEQDELKLAFEVIGRKGCPADKVNAVFQVAVKCLQGQDN
MVIMSALRAIVGMNKVQEIPIDTIRFLIGSTDKSLRNAAFVAAAGMAKSGVALPTDIIDG
IATKYICNPFGAIVLVTACKNLTCASHLTGRFLHGGLTCPKEVLLKIIEGVSVHKELSGQ
IASLKALAAP
Download sequence
Identical sequences A2FGN8
XP_001308850.1.43485 92777.m00080 5722.A2FGN8 gi|121890550|gb|EAX95920.1| gi|123434767|ref|XP_001308850.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]