SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|146094535|ref|XP_001467305.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|146094535|ref|XP_001467305.1|
Domain Number 1 Region: 37-95
Classification Level Classification E-value
Superfamily RING/U-box 7.28e-16
Family RING finger domain, C3HC4 0.012
Further Details:      
 
Domain Number 2 Region: 140-189
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000155
Family PHD domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|146094535|ref|XP_001467305.1|
Sequence length 549
Comment hypothetical protein [Leishmania infantum JPCM5]
Sequence
MSSSSPSQSPASSSVVPERGYVTASAAPATSPAALVESTEKYENICGICLTDIHPVDNPR
GRLNSCGHLFCSYCIKEWAKNTNVCPNCKARFTRIYTFHADSGKEEETKVRKRNYVAWET
SYYDEEGEDDAVNEEALLNSVLCDVCKKSDNAARMIFCDRRQCVYTAHLDCLGLAERPIT
FLCAACRKLREEEGDDHVPLAQTFSAASFAAASPEPPVPPTPVTVAAAPTRRRATARAAP
TPAVAAQTRATVAAVDTCGGGPSAEAPTSVSSRLASTSTVTAAPRSRMPRMTNNSSVECP
SDRRSSSSASSSASMRTEPSTVPRVRIDFSKPHLPLMTPATTTSQPSSRHIPTPLHTEVA
SAADQEYYFLAPVSHAVAAMIELNRVKQARAAAAQTRLQRERAKAERLQAAYDAHRSDLL
PSGARKRAHRSVADEVIAELESAEEEFRDPQQRRLMEERMVRKWAADILPVLRRRRYIEG
DTATAESDLWAQAISQARTMVRQKLGAKSESLRRRREQLVRAQAHREAAALAKLARIIAQ
HREGSLRAD
Download sequence
Identical sequences E9AHC7
XP_003392628.1.40037 gi|146094535|ref|XP_001467305.1| 5671.LinJ31.0440

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]