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Domain assignment for gi|154412849|ref|XP_001579456.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|154412849|ref|XP_001579456.1|
Domain Number 1 Region: 23-272
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00000000000178
Family WD40-repeat 0.013
Further Details:      
 
Weak hits

Sequence:  gi|154412849|ref|XP_001579456.1|
Domain Number - Region: 1023-1067
Classification Level Classification E-value
Superfamily RING/U-box 0.00971
Family RING finger domain, C3HC4 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|154412849|ref|XP_001579456.1|
Sequence length 1150
Comment hypothetical protein [Trichomonas vaginalis G3]
Sequence
MQSLDYYKIQPLPAIKDHIKAVGINDLKCCARSGTMLAFISDIPVPFIYNTNTEICRDFK
LENVPSSPLSAIDISRDCKYVITGHENGSISIWSIMDFKIVKNFSTGFNKKIVCLHYGWT
PNEIFLGDESGRVSKIQIRQLMGYFAISETFLIQGDEELTNIITMKQGYPFNAVFISWKT
SYMIYNGDTLAVTAKSSKYEDEISIDHYFDEEKIVLTVSTQSQFTLLCFTGPKKFTQICS
HKLNSGTIVISEFLASGLFVCITDGGELTIVSFDGKIAQQIPANDLYQSSVSSSYIQPYD
DKMILVQRFGCLLVDFLDWRGKIKTLVNSLNFAEAFRLLIEIDAGLAKDLVGLPKNPTEC
RRQLRDITSFVVLQFLKHYLLNGTDEEIDDAVASAVANVASLKMTSILEQAADLFTAVGK
GMDFYIGTLRSTVKQVSSLLTPAFIEQFLKLAQSSEMIDFAEEELLTPKLDPAYTVEIFK
VALKYNLIKFQKRLFTEYFDDFVSPCELYHKNNRLIDYCREVFLDENQNLYNKAAKRSVS
LWLLYPGNDGSFGRLQTLFNSSLEDSPKYISSILSVCPIPVSEEKELGYAPVIDTFLRVL
EKYNFEIAKPMLSSIIPYYERDKTLIPTTAALKHVIKYISVSSENENSTEFLLSKILDRF
PTLIPLNSLQELCQSRGFVNIALDKFMQSKNYSVIVGSFVNSSDKKVTVFDFINAHLEDH
DELRTSIIENISGLLVVDAQQTCRVIYKYFKEDLEYFIKTLERQTLFVFLRGLDDVVGDI
AFDKDLNIKYLDMLCEYSPQEAVHFLKNRLEIDAEKEFSIDLEKSLKIAKKWGRIDCEIR
LQIHNSSYNEAVELIGSEIESSLLDLLEIPVFDGCKSIDELSDSSVVNRQMQAVTIAVSL
LSELSKEENNIQRWQKVFKSFQFPLYLASKMKESDKKAVTLTLIFSYFCLQSLSIIGSEI
TFKILSLFFSALPRHIYHSALSYIFQSLNYQTKLNEVVEEILIDDCLKLIEKSDNKRMGG
LFSGEPVCAICHEPLLKAYSPFKVFPCGHCLHENTKCGYHEYCTVCSGSGNNNLQEDVVS
TDVNSGRNINRMMRMFNMKIKPQYSDYVECEYSSSSLMFAHVQELDGERATYAKPDVTSI
GTLFQLNIPK
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Identical sequences A2DM50
gi|121913663|gb|EAY18470.1| gi|154412849|ref|XP_001579456.1| XP_001579456.1.43485 5722.A2DM50 83007.m00277

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