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Domain assignment for gi|156089179|ref|XP_001611996.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|156089179|ref|XP_001611996.1|
Domain Number 1 Region: 918-986,1027-1043,1111-1288
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.69e-61
Family Tandem AAA-ATPase domain 0.00037
Further Details:      
 
Domain Number 2 Region: 123-194,271-335
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.62e-23
Family Tandem AAA-ATPase domain 0.0081
Further Details:      
 
Domain Number 3 Region: 769-833,867-908
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000000000918
Family Tandem AAA-ATPase domain 0.0059
Further Details:      
 
Domain Number 4 Region: 1019-1082
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000025
Family RING finger domain, C3HC4 0.025
Further Details:      
 
Weak hits

Sequence:  gi|156089179|ref|XP_001611996.1|
Domain Number - Region: 511-550
Classification Level Classification E-value
Superfamily SAP domain 0.000861
Family SAP domain 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|156089179|ref|XP_001611996.1|
Sequence length 1289
Comment DNA repair protein rhp16 [Babesia bovis T2Bo]
Sequence
MYVLARLIELNLLSKSTDGVTKNQHSTEATLKIEEGCDTKKDTSPDIKPLPADVTTLEVK
IENKTEEVEESAPSDDLETILTNQTFGFSDLLQKYKKTVIELLKKPIDANFDVTYCNSVE
PEKEVPILEPVHQPSQLLIPLLPFQKDGVAWMQQQEMGPVRGGILADEMGMGKTIQTIGL
LVVAKNEALANDLANPTATSAPVTDHKLATAEVKADTSHCSQESTQCNTPIDGDTCQQSS
VTYKPELPPESKRKKGKKNDKNAGVSMLNVQGGTLIISPLAALLQWYNEIKTKVEDGFIS
VLLYHGPHRKNLVKVLHEYDVVLTTYSIVEYEFRRVLNQSKTPCQYCGRMYLPNTLTVHQ
KYYCGPFAKSNSRREMNGHSTDLPTMILHRHAKLFPELQKLQGVVSISSVETAKKSTSNK
GEKPTLAKSDIAQVSAKNINALADYYSSDNLYEEIVDAFSTYGLQASTIEQLLPYMTVSV
PAFLDMVDQHRPTAVPRDRLLLLKKFASADNLDRELFKSTTVVRLKELLTSFGLKSYGSK
PELMNKVILFVNKMKQFANNLTAQLHKVESDDKPTSSDEHRDTVSKVDRVSRGSDIENDD
VSEDSQSSFDYTVDLDDTDVTTRSIPSTGYHSRDSEADTPAGIRRLISKTKILDDDTDVV
VQRDFNSSGETELMTPTRVAKTKVNAGNSASTSAGLNRDDNSDTDIFDDISLSFSDTDDE
APPKKTVIKKSKTVKYKPEKKDDHQSKGSAKVETRKQKRSTEKLYVGSALHEMVWNRIVI
DEAHHIKAKNNSTSNAILALRSNGTRWCLTGTPLQNRVGDVFSLIRFLRMYPYAHTFCSS
QHCECSSIEVSSEDYKYCDSCGHSRFLHYVYFNKFVLRPILLSGYENQGMVAMNMLHHDI
LDRIMLRRTKLQKAEDVKLPPMNVTIRRDSLSESERDFYEAIYKQCNVKFDTYVQANTLL
HNYAHIFDLLTRLRQAVDHPYLILYGPSSLAHKAFMATDPTVKAELEAKVSQSLPAAGSE
RVCALCFESLEDVGEFLTANCQHLFHKHCLNSYIECRPVDSGDECEKGITCPVCYVPLTV
KMTSTADAANSENTSTANVGVSKNSILQHFKLSEFKSSTKIEALFQELTTVLTTTSDKSI
VFSQYCSMLDLIAYRLKTANIECAVLVGNTKIESRRNILLEFNKNPSLRVMLISLNAGGE
GLNLQIANRIFLMDPWWNPAAELQAIQRAHRIGQTKPVYAIRFICKDTIEERIIALQEKK
MILFDATICSSGESMKKLTSEDLSFLFNR
Download sequence
Identical sequences A7APE4
gi|156089179|ref|XP_001611996.1| gi|154799250|gb|EDO08428.1| gi|156089179|ref|XP_001611996.1| XP_001611996.1.62033

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