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Domain assignment for gi|157435384|gb|EDO79606.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|157435384|gb|EDO79606.1|
Domain Number 1 Region: 799-1299
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.48e-60
Family Extended AAA-ATPase domain 0.052
Further Details:      
 
Weak hits

Sequence:  gi|157435384|gb|EDO79606.1|
Domain Number - Region: 3-67
Classification Level Classification E-value
Superfamily RING/U-box 0.000471
Family Zf-UBP 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|157435384|gb|EDO79606.1|
Sequence length 1304
Comment Regulator of nonsense transcripts 1-like protein [Giardia lamblia ATCC 50803]
Sequence
MEPCALCGSLAEPLVRCGACREVYCNNFDHKTSHIVRHLQLTGHDHIEPVSEFYIPSDVL
YCNDCETKGITSLGFLPTKADACSGIICCVNCRMYHDQTHDTSAWRPIISTHIDSRFFPG
HEEAENQGDEPNVGDCTFTGVESYYTPLPSTEMTSKDSIVPSVHDILNDDLLFTMDTYRS
NLFSSLSPMEAQPHERQTFLEMIEDRAASKVNDHLKLVDEDVPVVTDTALERLTKQSDAT
RNRRRIIKKSCIDDETARQEILASIVLAIPYNMEPQTLEAVTARGCPAMVMWAIIDGLLP
GFDFAIPRDKSTHVRTFVSKTDRCHILSHFYCRRKLHYFHYMLPILALERLITRDQLEKN
QVPVKGVQFRCLRGRWSVNNFDKSGLATICGAMWEVLIPIQDISMDIKIYKGENFILRII
DYQGENPKGFTLYNGILEIPLLCTSVNGDNVAFFVHQNSELQTSMPYNCVNYELMVKEDV
VEPLTSEMAIDLKFTDIASPASYKHSHFISKPNLQYEIVKCDNDATYKRHVSAIARLCAY
NPSVWSYLTSKKWTRVLNLSSEDFVDSSSERVRLTSFDCFIRFILLADYRMAHAFMDLYK
QGVVTRYGEVLDGIKTRTTDRKAVKDVIPQDKYSANSDPLIVHKFFNLEEQFKQLNMDVT
AELDRNEQMLIESRGNSRSTKGLQSSSGSSSFCREGIDAFQILSFAATNQKKKLSTLPWN
TPYKAMEEDNLDPGLIEKYANNFAHLTKGVKVRSSEDFDINEVLKRASCLMPKTLRSKAD
TERLISELSAFLDTLEEKVTLNFSQKDVIQYVLSRPITLVQGPPGCGKTFIGACLAWLFS
KVYGSLDHDSGSFRQATPVPVLICCPSNTAAESLTLALEPFGLPVVRVVSLARQRLAEYE
ESPNTYADRVCLHVLFEEILKLTLGDDAPSDFTPSKEARLIYENMLDEIPVKQFNEVYNY
LQMKKKENIDVALKQSAEEEISKAMFEIENIIISSAKVVVCTCSTSYDNHLSRVHFSSLI
VDESTQAIEPDTLCAIGHGCSHIVLMGDHKQLGPIVATNIARHSKLDLSLYERLQRAGIE
PHSLTVQYRMHPALSAFPSNTFYNGMLQNGVTQADRQLIPKPLSIDSFPWPIPSTPSFFW
HVQGTHEIGHGTSLRNDTEILCVEAIVDQLLKCYELKQSDIGIVTPYDYQKCQIEMQLKD
AGYSEVFVNSVDAFQGHEKEVIIFSTVRSVDKHIGFLKDQRRLNVGLTRCRCALIIVGNA
TALAIDSTWRSLIQHYYNNKVLVMGRDLDQLFQIESLDEVIPKA
Download sequence
Identical sequences E2RTN1 Q0GK31
XP_001707280.1.56740 gi|157435384|gb|EDO79606.1| gi|159114110|ref|XP_001707280.1|

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