SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|209875397|ref|XP_002139141.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|209875397|ref|XP_002139141.1|
Domain Number - Region: 890-963
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00879
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number - Region: 751-858
Classification Level Classification E-value
Superfamily vWA-like 0.0111
Family Integrin A (or I) domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|209875397|ref|XP_002139141.1|
Sequence length 970
Comment hypothetical protein [Cryptosporidium muris RN66]
Sequence
MHINKGITYLLFLWFIVLHFVYQKVRCEDSEESWSPPEFEHYGRELLEYRGHHHHHHHHH
YNGYRSNNYNQYYQYNNQRPYYEERELIESNFHHHNNDHIWDHSFWDHSQHFFAFNFSTS
TTTLPVTSIYTFAPTQTTTEIWTEQEGPIPSIEEPTTTTTTIWTIETNPIPDEEPITTTT
TIWTIETNPIPDKEPITTTTTIWTIETNPIPDKEPITTTTTIWTIETNPIPDEEPITTTT
TIWTIETNPIPDEEPITTTTTIWTIETNPIPDEEPITTTTTIWTIETNPIPDEEPITTTT
TIWTIETNPIPDEEPITTTTTIWTIETNPIPDEEPITTTTTIWTIETNPIPDKEPITTTT
TTIPTTTITTTIPTTTTTITIPTTTITTTISTTTITTTISTTTTAMTTIPITITTIPTTT
ITTTVPTTTITTTIPTTTTTITIPTTITTIPTTTITTIIPTTTITTTIPTTTTTTTITIP
TTTTMTTIPITITTIPTTTITTTVPTTTITTTIPTTTTTITIPTTITTIPTTTITTTIPT
TTAMTTIPITTIPTTTTMTTIPITITTIPTTTITTTIPITTTTITIPTTITTIPTTTIIP
TTTTTIPTTMNIIPTTITTTTIPTTTIMTTIPTTTTITTIPVTTTIPTTTTMTTISTTIT
TIPTTTTTTIPITTMTTISTTITTIPTTTTTIPTTTEAPKYAVSLVMDLSKVPNINDLKE
ISYSAKILYRKLLNKGIHTEIISIQSDNINSDPHFRNNLLSSIDSFEGSTKLERFLQRVV
QRNLNYYLNDGNPKQKLVYITSGFTGCTSPKSCPSVIQLKKGTEVFAIALRKNTAIYSEL
EYMVTSPVSSHAILMEQHEFRANTDLVANWISGDHIFTDKRYLLPEKTFKYYSQECLKCS
RNAECKKHHNTNTTDELGKYECICSPGWNGDGFYCDDINECTEISNPCLFMQCCINTPGS
YYCKYSLFKC
Download sequence
Identical sequences B6A9A1
gi|209554747|gb|EEA04792.1| gi|209875397|ref|XP_002139141.1| XP_002139141.1.43237 gb|CMU_038590

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]