SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|209877148|ref|XP_002140016.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|209877148|ref|XP_002140016.1|
Domain Number 1 Region: 2534-2678
Classification Level Classification E-value
Superfamily SET domain 1.14e-43
Family Histone lysine methyltransferases 0.0042
Further Details:      
 
Domain Number 2 Region: 828-929
Classification Level Classification E-value
Superfamily Bromodomain 8.11e-17
Family Bromodomain 0.0016
Further Details:      
 
Domain Number 3 Region: 768-833
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000244
Family PHD domain 0.014
Further Details:      
 
Weak hits

Sequence:  gi|209877148|ref|XP_002140016.1|
Domain Number - Region: 1151-1195
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000753
Family PHD domain 0.039
Further Details:      
 
Domain Number - Region: 1107-1161
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00177
Family PHD domain 0.017
Further Details:      
 
Domain Number - Region: 694-733
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00465
Family PHD domain 0.023
Further Details:      
 
Domain Number - Region: 1854-1886
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0062
Family PHD domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|209877148|ref|XP_002140016.1|
Sequence length 2678
Comment SET domain-containing protein [Cryptosporidium muris RN66]
Sequence
MQKKRSGRNKPDHEVRKGTRKLRKKSNLRINRSYSSQCDKSSVNSKLIEIYVKLNDIDNS
SIKLSSVDVKSAQDGFRYIGFRCRIAVSRHKSFKSRSSNSPDAFNWIEGIIKYWDPKFRM
FFIHFFIAPNSSKYPYPISQDKICTDSHGWKYLITSENSPPACAQIDELVLSPYSIDRGW
FEPNPITLKYYETSPIFTKAMETSLNNNSPDLSNTHSDCFICSLKCDKENSELVTLNSEE
YNNKLHFDSVKSESIILKDVHNKLNFIEENTSNSIYSNCKFNNLDNLNFEFLSENTKEKT
DTSYNVLSDSLQIPSCYRCNFKLHKNCINEQSIYEDIRNPSKKTLIPFCNRTKKSLLKEA
EFHRNYIRERRWLWKQFIVTKKSDPHNNVNKLDRIVKKKGGSDINYIGIGSKNPFLGGQL
PYDLVDVDEMEKILPPEVTKVITDNYMMSHTTIRRLLMKLPNKMGQLIADHQVKLFCRTY
RYKKRNKLSPLVLENIDNHIKCEKEDINDEFNLEKIKKREYNVFSDVYTKENNGENKDSD
DEIDRTEGNKDALNETENLDNSIINAINNNLLRDSQNNEGNLQDSDVYQDYSNKEIESSL
LTNENSLISENMPNLCNDNSTIPLSTLHKCNARVSDYIYRDECTHPPDDMLRYICSDCLE
CIYCKEPLKNIPQLLKSTELPNRSILYKQIPSRMENYVLCNICHVGFHGSCSNPFIPPLI
AEKKYFKCSTCCYCSHCGYRDHNFMDYAAWDTTFTSCIRCCRGFEKGQYCAICRQIWSSS
WDGDWLQCDTCRFWIHTECDTNLINSIEVLKSPSVSYHCPVCRSNEKKPKYQKILDYLFC
IDKHKDFYVVPPSSYQNYWKVVKIPMDFITIAERIKSDYYTDEKEYEFLRDILRIIHNAQ
ISHMPNHRIFKLASNLLKKCVSLYQVLFGNTTLKQIFSDLSKSETDITLLTLLKSSDINL
SIENSNQIISDIQILNNKLILNTSSVISSEAANNNGGSFKNESTEISNNDAEYKYLKILE
DLCSKIKLVDPNMEMRISKIKPDIIQCNGELLISNNLTPKTIKCQNLNKKRSNLELIQDN
QVINKLLSFQYDYSSDIFSKLSQKGIETFFPKNQKCTKCNLKFEKLIYCNKCGEGIHWEC
AGGEYYNELSSGICTYTCNSCNMCCICNKIASEEPILKCLSCNKLAHYSCIWINKRKPLR
GTNNGDDLKADKSKENDYICLWSVISCPGGSDISTALIHTPISAINEEGYYQYVTDAWYM
CNYCIMNRKNYNKNFNVQLVRSRMEYIYFKDKYFEYFQNILKDIQNTDYKRYFKDPKMLD
YLVNIDFDEFQFPINQGNVLICDLCSRPVLATQHNDLADLCFNNQLCTLNLPYICSYCRN
TLSIKTNNSGFPVALSSLLSTVQYRNILTEDIRIITRILLEPCVNAILNTAANNLNIFKL
NTFLNKVDDNTLQSCMNSIFPKYFDSPFFEELIYSTRTPFIEWYTYYVGSGRMETFAIKI
DYLRYLIPGLPVTTISSHLFKNIISNIEAVVLQNKDIKKPNIKCDYEYNQEYTNQLWHPS
CKQQVDFLNNYVKILLNIYGSSSNFNYDHFIASIILEARIDIGMILAIMSSFRRFLLNQN
QLKIQNTQDLSKNLLFNKNNTNSTNLGLYNNPNAQVFSCNHNKIKDVISTGIKFMNNYLR
SLDILYFGIGQSEYKTNEEYPKLSHGNMLLVNESSSLLVSLYSLLFISTTKKYQVNSEMK
NIQMCFFCKLSSENYILGPMIKFLDSYFLHKECILWSLPFILEPILNSVGVGYESYFDVN
NDVHKTSLINGDHPSTTPNIKKWHRTFGVTNWPLLSNPLHIQTNDLIVTINEMEVLRCCI
CKELGATIKCSGNDSCMAYFHLICILQNSNYTLQEAKYLYEASKVKISDIGTKYGDIYCG
NLSKEEVRSENYIGNFISKDDSKFTNINNNEDLQSPQKKENSASSLDKFVMKIIPRIKYR
RVWCQQCWSQYQHIVEPVRISDNILSNNKDQSNHLQDNYIVPTEFYYNTTEGLSGGIWYA
LARLLSVHVKILEPQDSCETKDFEHLYPFLYNEAQINIKLKLEIDKQESNLIHSALYKFI
QYINMILYKRKKGILQENSNLELLAEIIRNISEYTLKKRIYLNPKNSNYSRIFEGSAYGI
QVNPNLLLVNLGKITNKLNIGKYSYFMSGYQAIRTWYMPKLLSKKFGNEKMTQFLLSISD
QFSGKNLNENRRLIFSIEWLPDPYFWGLINNSLEIDEKYSRVEKNRDYSRYIFEIKPKIA
KDIEIENSSFISNNENIIRLMKIPLIYGSNINEVYNNFLKFSTMDNTEDLSNTELSEIAQ
DLIFKIEDKYKDSNFKSNSSNCEQSIYNLDNKNLKDSINNSTNIESKDALTFFGLNEKFI
NDLVPPLLYKYYINELILNSPADIVNPYLWSNHRVSHVNSNIDFEGISASLDERYYPLAL
GEVEHNGEKICEDSYSILLLQTSLNSDSDIILNNTFKHSNILNISNRISRRRTKAEDMTP
AMAYRYLESLPPDKRLDVKKSKIHGYGLFAKECIHPNEPIVEYVGEVIRNSVADKREKIY
EQEGQRDGSCYMFRLDEHRVIDATNCGNLARFMNHCCQPNCVCKVITSDDGNKHIVIFSK
TEIKPDEEVTYDYQFNLEEESEKIYCYCGAPNCLGRMN
Download sequence
Identical sequences B6ABB5
gi|209555622|gb|EEA05667.1| gi|209877148|ref|XP_002140016.1| XP_002140016.1.43237 gb|CMU_026750

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]