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Domain assignment for gi|68126208|emb|CAJ07269.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|68126208|emb|CAJ07269.1|
Domain Number 1 Region: 309-647
Classification Level Classification E-value
Superfamily L domain-like 3.4e-47
Family Internalin LRR domain 0.0034
Further Details:      
 
Domain Number 2 Region: 69-118
Classification Level Classification E-value
Superfamily RING/U-box 0.000000884
Family RING finger domain, C3HC4 0.018
Further Details:      
 
Weak hits

Sequence:  gi|68126208|emb|CAJ07269.1|
Domain Number - Region: 213-301
Classification Level Classification E-value
Superfamily L domain-like 0.000663
Family Rab geranylgeranyltransferase alpha-subunit, C-terminal domain 0.077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|68126208|emb|CAJ07269.1|
Sequence length 673
Comment hypothetical protein, unknown function [Leishmania major strain Friedlin]
Sequence
MLHHRHTLPESLFHVSYEPSTSSSTFVTEAPTPIDDVVAVTSQRGDSPLSSCDSRDAPRS
LVPGDLSMHRSFLCYVCCEPLFRAMSDGVCGHHVCEACCLKMSVSGTATCPLCGWNGSWS
TDAAYSECVRDAVEARLKESAVVLLRDAYPALSSGCVGDVVDSCFDRSCLTVDLHQAQQY
LAAVPPDGVGAVCTSLAAPDKIPNKAAVFSLRVEGPWLTSCDLVRRFLQLQVLVLCDCAD
LVSLRGVECAPLLERLTAERCGLVDTLGIDACPCLKSLQLRECPRLSHLGWNQILNSQSS
LQESSGQDGGCAALLSVSVFRCPAFQGIGLLSAAPHLREFRAQRVRISSLDALRECRHLE
LLDVGGCQQVCCIEALRGAKALRYLDLSNTAVSDIGALSQCTALERVNLSGCLRLRSLDS
LECCTELRELQASRTNIETLIGLRLCRALKKVDVSGCAALRDAAALTHLSQLTHVDLSFT
AVDDVSSLAYYSGLESVRLRGCRYLRDYSPPHNLEDAPPLRSLDLSNTSVCSISEWGRCP
PRLEKLRMNGCTRLSDISVLQSSTGLRIVDLGNTSVHSISPLISCAPALEELRMHGCTEL
SDISVLQSASRLRVVDLDNTSVRSVSPLRLAASELEELRINDVTYQGEVPIFQSTGVQRR
CNMINTGASSRSL
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Identical sequences Q4QD45
XP_001682753.1.98313 psu|LmjF19.1640 gi|157868400|ref|XP_001682753.1| gi|68126208|emb|CAJ07269.1|

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