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Domain assignment for gi|68127228|emb|CAJ05317.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|68127228|emb|CAJ05317.1|
Domain Number 1 Region: 551-577,641-676,738-818
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.09e-19
Family Tandem AAA-ATPase domain 0.0095
Further Details:      
 
Domain Number 2 Region: 1423-1472
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000265
Family RING finger domain, C3HC4 0.0089
Further Details:      
 
Domain Number 3 Region: 1268-1354,1518-1594
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000434
Family Tandem AAA-ATPase domain 0.039
Further Details:      
 
Weak hits

Sequence:  gi|68127228|emb|CAJ05317.1|
Domain Number - Region: 1082-1123
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.029
Family Tandem AAA-ATPase domain 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|68127228|emb|CAJ05317.1|
Sequence length 1626
Comment hypothetical protein, conserved [Leishmania major strain Friedlin]
Sequence
MSRKRAAPSMRLEGPAAAPLLEEALLVHTRSALARNFMLITERTIELAAQPHAHCIVGDL
DTLPGTAAVGGTAEPAGDDVSSAKSLMLDARGASNIAMRAVLPCVQYFIVSECARVARVV
REEGGNGYGDDPATRAAELLGFLLSMLDKYDTFSNLFAVACPSCRVAGVSYSSFSFLPQF
LALSQRASADEIHLMDQKSLIERLGLLDGCRATTGQPLDVMECCPFGEAHLSLYLLIRTS
SGERHNWRLSRLWWQHVPFQLLSFPAIAKAAKAFETSMGQYTADRTRDLIRHQHMAANSG
GKWAPPTCKQAKSPKFTAAQRALIKPKAGCLTWAEELLRAILPETATHPWHRNSADLQSR
IRSCYAYTCADVNHGGYFSATLEPPLSLLFSTFSTGSFASTASFVQARLLFAHMKVCQHV
AEALLRGGCCSCHSRHDAAAGEVLFVEAHGPFMTALRHCRDESYLLTGNDTVTVGRTASA
AVAVDAAEETTTAPGAVAAGGCQEAATFYAAGSFSRFQTTLELTGSMNAAQIVSYVTQVT
AESTETLPAAQMPRQYIRAELKRHQLENVQRMWNKECEGYRDHVSVPLYHVDTAAMPAAR
QVGVMYYCAATNETIVVRGSGGPVVAGREAEAEAWNAAGGRIRGGLLCDNVGLGKTLSIL
TLCAYDRAVREAGNSGGEEAEALVGEIALATRKVWQVSAKTETMRNCMLRSTREVLHWAF
GNFRAGIVPHPTAPTRLPHTTLVVVPLSIATQWIEEIRKFYPTASYILFYGAKRAQYTAA
DMQRADFVITTYETLSTHLRQEACGLQFWLARVADEADDAVCAKAASHGWSNLMPSELFA
AVQQYASEVVWPAAGGMREAGGIGRGLEMTHICDCTVVPLPQGGQRTCGSHRSDGRGHAP
LGSGEKLQVSSPASDTTTSSNTWTLELDGVDGVSVFRCPTLSITVTFDNSVVDATARSVD
RHTRLPGTGAVSDAFLDHTWELLRVYSATTTSLPVWQDAVTQCRLFDDQGSPSDTSVFLA
LLYHAAEEYTLPDSARRELVRRVLLPPLWRVLAGYWVHMKAHYADVAVAETTGRSALRVT
DLLFRRVVLDESQKCSATSLFHLLSGERRWAVTGTPLNNNKTESLGFALRFLGMHSAARL
LSRPPFRHASLTHAYLNTHNVLSASDAAGHSLADSVNRGLRSLWVRHHSDTLPVSVANGV
AFCLCAQCVQRDLYSASEASFTNIPSEYRLWTPPRDLQVGLPCLPNSLFEVLTLTMVRHE
RDEQVSRELQLAPARYHVHSAALTADEMRLYDRVALVIMNVAARLHRQGILSSRMGYVMQ
WVQDLCRLCLHPSRVGNDKLLRGDIEAHMLRGVRLMSDNGVCGAGITEVLAASFVAATPQ
EALEWVKLVAAARKPGLLRDSSVPEETATTLAELAQVPPLLPPCGVCMDTMAEPTLLKCF
HMFCKECVLGVIDASREVAGNASAKCPYCRDRKSMLEEKRVVTVDTAVPVKAAAETRHDD
DCCRTATAHSGDEEVDVVLASIGNGSRVRAFLEVVEEIWRTQPDDGVLVFSKYPTFLKLA
HDAVVAQGYAPHMVCGASSLAQRQRAMRAMQPPSGASVLAAPYSVCHVAQRKRRPQLDLR
QPSRFP
Download sequence
Identical sequences Q4Q938
XP_001684160.1.98313 psu|LmjF26.1560 gi|157871221|ref|XP_001684160.1| gi|68127228|emb|CAJ05317.1|

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