SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|70937145|ref|XP_739419.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|70937145|ref|XP_739419.1|
Domain Number 1 Region: 43-109,143-184
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.57e-18
Family Tandem AAA-ATPase domain 0.0052
Further Details:      
 
Domain Number 2 Region: 285-322
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000571
Family RING finger domain, C3HC4 0.023
Further Details:      
 
Domain Number 3 Region: 185-267
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000186
Family Tandem AAA-ATPase domain 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|70937145|ref|XP_739419.1|
Sequence length 427
Comment DNA repair protein rhp16 [Plasmodium chabaudi chabaudi]
Sequence
SFYDESENSSDTVMSYASIIIEKNKIKNKNKKMKRKGSDIFDESLLHLIEWNRIILDEAH
RIKNRIASTSQSIFNLKCSGYRWCLTGTPLQNRIGELYSLIRFLEFYPYAYYFCSKKDCK
CSLINFEMRDNKYCTICDHTRMCHFNYFNKRILKPIQSFGYNGEGVNSMFYLKNEILDEI
LLRRTKGEREKDIKLKPLIVSIRKDKLSNEEKDFYESLYKKTTTQFDKYVKSNTVLHNYA
HIFDLLSRLRQAADHPYLILFGNTFLSDPSGKFIKKNSAIIPAISNDFVCGICLENVPRK
NNVNTKCNHHFHKDCLKQYIESFELENKGTEGEENYGIKKYNTYNIVTNCSDTEKCDNTN
MIVFGNDDNNEEKNNSELNRNYKSLSVVKFKDRENSQFVSLTNNIENIKDHPLGCPVCYV
PLTVDFN
Download sequence
Identical sequences Q4XU84
gi|56516405|emb|CAH79528.1| gi|70937145|ref|XP_739419.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]