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Domain assignment for gi|71409051|ref|XP_806892.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|71409051|ref|XP_806892.1|
Domain Number 1 Region: 427-475
Classification Level Classification E-value
Superfamily Zinc beta-ribbon 0.00000000000000147
Family Transcriptional factor domain 0.0046
Further Details:      
 
Domain Number 2 Region: 180-257
Classification Level Classification E-value
Superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.00000000000654
Family Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.0031
Further Details:      
 
Domain Number 3 Region: 7-96
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.000000000283
Family PWWP domain 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|71409051|ref|XP_806892.1|
Sequence length 477
Comment transcription elongation factor S-II [Trypanosoma cruzi strain CL Brener]
Sequence
MVPYPVYEPFDRVWVKMEGYDWWPARIVSDEELRANGQSRAEGCDITVYFYEGTTTPASL
EHFKSATTSITFFETSSEKAVTADADLLAAIRRAETDETANPLKYEFAAGDRGSANKTGD
GVAAGAAAVVTATGASVSSTDGMRRGTGNAAANQRPVSKRSRAAELEERHVAAPALNLLR
DEKLIEIAGRINEAVSICDLPSLRIELCDLDTVSVTVRQLETTKIGVAVGSILGRKELEK
LWPLSRAIISSWARAMPVETIEAIKRHQQYRLGKRQDDANKSSTMELSMMSPLAAGAPSF
ADVNDVSGPLASRSVENGERVRMRFVHRVRKLLDNPTDPPIPGVTSSDLEAVAEELCRDV
VEPEDRKHLQEQLEKPGMTQLRRSLATRAMSGKEFLKLPRSALMTEDERRMEEARITKMI
EEQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTTKFVTCLECKYVWTTE
Download sequence
Identical sequences Q4CXN7
XP_806892.1.87722 psu|Tc00.1047053511115.40 gi|71409051|ref|XP_806892.1|

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