SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|23496586|gb|AAN36144.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|23496586|gb|AAN36144.1|
Domain Number 1 Region: 459-525
Classification Level Classification E-value
Superfamily RING/U-box 4.86e-17
Family RING finger domain, C3HC4 0.0088
Further Details:      
 
Domain Number 2 Region: 631-768
Classification Level Classification E-value
Superfamily SMAD/FHA domain 0.0000000000000155
Family FHA domain 0.0042
Further Details:      
 
Domain Number 3 Region: 818-932
Classification Level Classification E-value
Superfamily SMAD/FHA domain 0.000000000000421
Family FHA domain 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|23496586|gb|AAN36144.1|
Sequence length 1785
Comment conserved Plasmodium protein [Plasmodium falciparum 3D7]
Sequence
MSISNSSEQANHKNMEDDLNLGENNNNHNFISNDDGSFIDDNNIIEDECITPKDDEENIN
SKRKKKTGKMNNEENKNIRLGRRNDQSRCDQGNTINYLQQNNNVNINSVSNALHNVINEV
MNSCVAHMNNNNNNNNMNNSNHNNNNNNIHNIHNINNNRSTYNNLNFNMFSLNNNNTCNY
NNEPNNYFLQDGVHAESNNADDDEILVQNNDGEENHVDQEGHGHGHRSRHRQRQRRQQED
EDNHRSINELQDDENYNNNNNNISNNNNNPNDEQNTSENEDHNNDGDNNNEDDDEENDEL
ELEDDEHDDDDDDDNDEENDDQLNLEHLNMISSYERRNKVQNRINHQNNNNSNNNINNNN
NNNNNIFVNNLHNNNQNNNSLNQLSGVHNNNENLYNDSGERYNLSNNNSSLILKNDKKKN
NNNNNNNTSKNNMNNITSNNKSLSHINTLNSSIIDNLTQYLQKELTCPICLDYFYLPVTM
NCGHTFCRYCIGHNKLNGKNCPLCRQPLGNTACINTIISNLVRIYNLRRKSLKIYKSIEI
VNTVDEMWWNENFIKPQVSVSLFLRIFLHDMISPPIFFDDLTSCVIDFFTVNKLWSKAKW
VFNIKDCRVFSELIGYDKDDKETTSERLHAWVERYITQNPSMCMRKDEKVILKLYQDRTH
RIDSHVFDSSVLPNRLPWDGGRHAKSLIHMPHSSVSLSHLLFVKAENNNIGVVDCGSTIG
TMIKVNNYHVLKEGDVIHIGDRLEVTVSIDKNTAGMPYKGYVWNKNANKVLDRHELNELI
KMETNSNQDIFITEDQIPSYCENIESNLLIKFDFGTTKEEITPKTEYIDPKGVVLGRGPY
AQSSYKKISVTNSNGYVSREHCLIYYDGSKDAGERWLLRDTSTLGTFLKIKPFSNPIPLP
IGSIFKAGQCKIEVCSHDSAQFIQYPERSISLHNTNNPPNTDNNNNNNNNADNRNNDNDN
NNTNNNNNNNNNNNNNGGSNNSSGSTNNNGGNNSANNHTNNNNNNNNNNNNNSNNNSNNN
NSNNNNNNNSNNNSNNNNHSSSSNNAPNSSHANNNHSNDNNINNNYRNNHVHTCISNNSY
HRNSGNTNNFSNNMHSSYNNIINGIYNYQNNSRNLNNSSSFGRTNILQDNSHHENMSNMA
NQNNNFEAIVQNLFQRNVNTLGRENNPSLFSSRNEQLRLNNNHNIMNNNNTNNNNNNNNN
NNNNNNNNNNNNNNGNNNNHCSHGDTYFYNYLRYSVNNNGRNHNNSGSIDYLNDNEESDN
NNNNNNNNNSSTKERNNNRSSVNDSCIVENHQHYHQNNNNNNNDNNNDEHDHNNNNSSGH
GNNNNNNSNSHSNSQNNNNNNNSNSNSNHNHGNGHNNYNKSHSNNHNYNHLNVNTPDYPF
NVNTRFREHAYNSSLGSCFLKNKNSEMQIPQLNCTLNSNHNNMNNFVNCNDNNYNFIPYN
LDQSNSKYENNISFINNNNNNNNNYNNNYNNNNNMINMINMNSLNNQHTAALDNTNSLFN
IDKFTLERRNINICANINSIFNNINRDSPCLDNRVNLASNETIQNAPIRNMHSLNVNKKS
EKPKTNDVYKNINKNNIERKNSKNGLKKFLINNNKLDILLKKKRNHSETFLYTNQMSTTQ
DEEETGPNTINTTNYAEAGGIYNEMNSLKLIYNYINNLNINNKKTNVSPTNNIIECNSDL
KLENNANTKNLNSLICSGEFNHITENNHNNNNNNNMNSMINNINSHNHIYNNNQNNINHF
NDLHHSYNNINDPIIIGDIKTKKLLFSDHNNVNQNSFFQSIKMNN
Download sequence
Identical sequences Q8I5Z0 W7KD01
PFL0275w 5833.PFL0275w-1 gi|124805523|ref|XP_001350464.1| gi|23496586|gb|AAN36144.1| XP_001350464.1.26446

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]