SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|407465725|ref|YP_006776607.1| from Candidatus Nitrosopumilus sp. AR2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|407465725|ref|YP_006776607.1|
Domain Number 1 Region: 73-205
Classification Level Classification E-value
Superfamily vWA-like 0.00000000000024
Family Integrin A (or I) domain 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|407465725|ref|YP_006776607.1|
Sequence length 290
Comment hypothetical protein NSED_09375 [Candidatus Nitrosopumilus sp. AR2]
Sequence
MSQAKEILKKIKKLDIKTKQLVDGIITGNYNSIFKGQGIEFSEIRDYRAGDDIRAIDWKV
TARFNHPYIKEFIEERDLQVYFIIDISGSGSFGTNISKKEKSLEIIASLMFAALRNNDGV
GIFLITENVEKFIPAKKGRKHILQLLNFLTTFTPNSRKTNLKKSLEEISKIIKRKSIVFL
ISDFIDNSEYLKPLKLLRKRHDVIALRIVDPREREIPDIGMIELEDEETGEQILVDTSNE
EFRNSYLRLIYENDSKFLSSMMKIKVDTIPLLTEEDYSTSLKKFFKRRNR
Download sequence
Identical sequences K0BF31
gi|407465725|ref|YP_006776607.1| WP_014966030.1.40567 WP_014966030.1.82955

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]