SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427711687|ref|YP_007060311.1| from Synechococcus sp. PCC 6312

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427711687|ref|YP_007060311.1|
Domain Number 1 Region: 10-240
Classification Level Classification E-value
Superfamily Ribulose-phoshate binding barrel 1.16e-63
Family Decarboxylase 0.0000103
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|427711687|ref|YP_007060311.1|
Sequence length 241
Comment orotidine-5'-phosphate decarboxylase [Synechococcus sp. PCC 6312]
Sequence
MSKIIPQTIAERIIIALDVPTTEAAFRLVDQIPQASFWKVGLELFLRAGHEVIPELKARQ
KHIFLDLKLHDIPNTVAAACRILANYGVDLLTIHTTTGRTGLKAAQAALKESSQQLGISP
VKLLGVTLLTSFSSRELAFDLKIPLELPDYILQMALLAQESDLNGVICSPQEATMIRQAC
GEEFLLVCPGIRLPSQQKKDDQQRTMTPQAAFQAGANYLVIGRPITQATDPAQAFQTLLE
T
Download sequence
Identical sequences K9RQL6
WP_015123312.1.5248 gi|427711687|ref|YP_007060311.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]