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Domain assignment for jgi|Rhoba1_1|52818|estExt_Genemark1.C_5_t10187 from Rhodotorula graminis WP1 v1.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Rhoba1_1|52818|estExt_Genemark1.C_5_t10187
Domain Number 1 Region: 211-558
Classification Level Classification E-value
Superfamily Cysteine proteinases 2.94e-73
Family Ubiquitin carboxyl-terminal hydrolase, UCH 0.00014
Further Details:      
 
Domain Number 2 Region: 1045-1123
Classification Level Classification E-value
Superfamily DUSP-like 0.00000000124
Family DUSP, domain in ubiquitin-specific proteases 0.0065
Further Details:      
 
Domain Number 3 Region: 1215-1271
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0000000871
Family Ubiquitin-related 0.0099
Further Details:      
 
Weak hits

Sequence:  jgi|Rhoba1_1|52818|estExt_Genemark1.C_5_t10187
Domain Number - Region: 1395-1417
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.00282
Family Ran binding protein zinc finger-like 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Rhoba1_1|52818|estExt_Genemark1.C_5_t10187
Sequence length 1420
Sequence
MPPKKKPRTTESISSDLASAFAALSTNKLHPDHLPPDTLLRAYGLGGTRTATEPFHRTCP
NRWTADPTPPPPPTRAHDARTSSRSSPSTSASSSRHKPDTSTDVIVLDSADDDDDDDDDI
VESDDLSIQAGLKRSAAAASTSTKSKAKAKGKAKPVHNADKPCSPDACKDNPRCLNWLGQ
DKWEKDSKARKDFRKAAGLPDDPTNDRDPDTPVGLRNLGATCYANSFLQVWYRDVKFREG
VYSCLPPANGNVEASPLFQLQVLFAFLQSSQQAVYDPDPLVEALKIKRTEQQDAQEFSKL
FLTLLDWEFKKQGKRAEGEGSASGNKVARIVEEQFEGKMTYGTECLTCGNKSERTSTFLE
LEVNLTRACKLEDRIEASFDKEQLYGDNQYLCERCDAKRDAVRYSYLSALPPVLHFSLLR
FVFSPKDFSRSKSQHAIAYPLSLDMGPHLPVDARTGKRPSDVWYDLKGVLMHKGQSAHHG
HYVAQVFDETRAKWFLFDDESVEAIDDLNAPTVHDEDDEPVVAKKKKLAAGFTRNKDGSI
LPKSKDAYMLIYTRRDSTASGPPSTSSSASSTGAAPAPAPAPAAEPTPPALAQRTVERLD
TAYRADVEAYERQAADVERRFDEVREGKRRVYRSWAVEEDDEEAFLVDKVELRRWLEDGL
KVRKPASDEGKGKGKEDGKGEGEGEGKAGAVEGASGDVEMVDGGEGDKSASTEGDEHGED
VKMTSADTSTATASDDGPSTPAEPLQSTLGAQLDSASAAPNGDAHAADSPREVNGKDKGK
GRALDQDDERDELPHPSKLGNGSAASAASSGDKEQGVGAEDVKTISNADVVCEHGKADPR
RAEQMKRVSQMGIMALRDLGVSIETELLIPRDLCRHCVGGLAADHLYALEHPKRVAEYDA
ANTDRNPNLKTFTISKTWLTDWRRISPKMHVRGSFADPSPSDEPYRSDVICPHGGLQPDI
KRRSIVMADAVKVLKKAIPGWMPVELDLCEVCEAEHMVNVDGFGELKKQHVLEKKSLKTV
LAAAGGQTKLNGARLAINENPGFDHVVNKEWFRKWVTWMRGAPGQNPRPGKLDNSRLLCR
HGLLCLDVPLEVETSRNVEIVPPKEWSVLEQCYDAGPKIHIWATGRNGAAPASNPAVCDE
CLEESRKNFSTAEVRVVRLGESDFDEAGQRKPAEAGSPEVDRKPSPPSHRGPVGGRTSSR
IANKTNPFFAKSAKFINVAKGDLVRHLKHKIEEETQIPFAAQRLFFKHAELDEASASVDD
LGLAAGDTLEVFAVDTNVDLDQLDDDPDSGATNKKRRKRKREEGFGGTGLFGFELALEGV
DEADAEAIRRAVAEDAAEQGEGEGEGDGNDLGAGADAESSMCNGRAPGANGRASVSGRRS
SSSSAAVKMDDERAVKCPRCTFDNAAGLAVCELCDAPLGG
Download sequence
Identical sequences A0A194S5D1
XP_018271841.1.32311 jgi|Rhoba1_1|52818|estExt_Genemark1.C_5_t10187

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