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  Home > Genomes > Hydra vulgaris > gi|449663135|ref|XP_002156276.2|

Domain assignment for gi|449663135|ref|XP_002156276.2| from Hydra vulgaris

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|449663135|ref|XP_002156276.2|
Domain Number 1 Region: 899-1042
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.16e-16
Family Leech intramolecular trans-sialidase, N-terminal domain 0.038
Further Details:      
 
Domain Number 2 Region: 196-233
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000034
Family EGF-type module 0.0073
Further Details:      
 
Domain Number 3 Region: 111-243
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000973
Family Growth factor receptor domain 0.0055
Further Details:      
 
Domain Number 4 Region: 769-806
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000162
Family EGF-type module 0.014
Further Details:      
 
Domain Number 5 Region: 491-526
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000174
Family EGF-type module 0.022
Further Details:      
 
Domain Number 6 Region: 565-599
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000184
Family EGF-type module 0.01
Further Details:      
 
Domain Number 7 Region: 326-363
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000254
Family EGF-type module 0.016
Further Details:      
 
Domain Number 8 Region: 860-897
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000415
Family EGF-type module 0.01
Further Details:      
 
Domain Number 9 Region: 527-563
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000112
Family EGF-type module 0.019
Further Details:      
 
Domain Number 10 Region: 601-635
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000138
Family EGF-type module 0.015
Further Details:      
 
Domain Number 11 Region: 424-462
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000207
Family EGF-type module 0.012
Further Details:      
 
Domain Number 12 Region: 51-90
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000215
Family EGF-type module 0.014
Further Details:      
 
Domain Number 13 Region: 288-324
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000177
Family EGF-type module 0.013
Further Details:      
 
Weak hits

Sequence:  gi|449663135|ref|XP_002156276.2|
Domain Number - Region: 263-300
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00065
Family EGF-type module 0.026
Further Details:      
 
Domain Number - Region: 406-423
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0273
Family EGF-type module 0.039
Further Details:      
 
Domain Number - Region: 236-255
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0328
Family EGF-type module 0.016
Further Details:      
 
Domain Number - Region: 365-385
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0449
Family EGF-type module 0.02
Further Details:      
 
Domain Number - Region: 464-488
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0979
Family EGF-type module 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|449663135|ref|XP_002156276.2|
Sequence length 1047
Comment PREDICTED: neurogenic locus notch homolog protein 1-like [Hydra magnipapillata]
Sequence 
MLLGWSQEHISKADSSLESMASILHVGETNENAVEKSQISFPRDKTPVSKSPCEFNPCSN
NGMCVNDPGLSRGYYCECTDEYQGTHCEERKCKCQNGGSCIGEGVESKCFCKAGYGGITC
QEHTQCNEDTCLHGGVCIEQIGGFKCKCDNGYKGQRCEEYDKCKPNPCLHGGRCLDFGDF
SKCECKKGFKGKQCEDIDFCVPNPCQNNGQCFGFPGGFQCECPKGFNGKTCQHIIHCLSN
PCLNGGECSEVGPTYDKPHGSFNLGVCSSSKSGFTCQCTEGFKGITCTESDPCFPNPCIH
GKCTEFGGSYSCSCTLGFKGLNCGEIAHCEPNPCFHNGVCQEIKGGVGFVCQCVSGYKGQ
MCQKKDLCNPNPCSNDGKCSDLLEDVQVTPNSLLSGNYVPQKRASEGEIKCTCAAGFMGE
RCNQINPCYPNPCEHNSLCIADHGANIQCNCSLGWKGKHCEEADLCAPDPCRYGTHCQQT
SAESYTCLKNLCSPNPCSNGGQCIVVNDEAFQCACPRGWRGKICSEQDLCVPNPCENGGV
CHVNNDAEFSCECVDDYIGAKCQGFCAGYPCKNGGTCLDTDGGFTCRCNNGFSGPFCDES
VCFGAPCENSGTCVPYYGIALCKCTEGYTGAHCSEIKKRGPKSFHISQQQDQQQPHSTVT
KSQVTNVSPSAILFQRVEEILNSDKEVDTIQPNLIEGSKLTAENDKPKHITPPTHSSNPV
IAPTEIQTISPITFRLPDLLTTLTYPTTAIQPAPTFLVHVQSKSQSIDDVCNPNLCEHGG
TCVVRSDNQPECICLTDFSGPRCEDIGMLGYSSAPKFFPNDECNHCDKNAVCTNGHCICA
KGFVGDGLECWPFSSADSEWNCNPNPCQNGGTCKNGRSHCVCRLGYVGIFCEKYCPPSVH
LSFDSKKDNFVQDESGNENNAVLMNGAKVVYEGGKCDSGVSLSGGDILFDGEKFKNKPVD
AITMALWIKLDSTSGIQSVFDTVGGKHSTHRDGQYHVEIDNGKIRWFHRNEYHMTIFSVV
TKPILQNNVWTHIGGTYNAAKREAKVD
Download sequence
Identical sequences gi|449663135|ref|XP_002156276.2|

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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