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  Home > Genomes > Hydra vulgaris > gi|449666908|ref|XP_002154505.2|

Domain assignment for gi|449666908|ref|XP_002154505.2| from Hydra vulgaris

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|449666908|ref|XP_002154505.2|
Domain Number 1 Region: 176-367
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.55e-35
Family Pentraxin (pentaxin) 0.0033
Further Details:      
 
Domain Number 2 Region: 1023-1130
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 5.76e-21
Family Spermadhesin, CUB domain 0.0015
Further Details:      
 
Domain Number 3 Region: 1132-1237
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.19e-18
Family Spermadhesin, CUB domain 0.00076
Further Details:      
 
Domain Number 4 Region: 847-916
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.78e-17
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 5 Region: 548-674
Classification Level Classification E-value
Superfamily Growth factor receptor domain 6.28e-17
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 6 Region: 963-1025
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.01e-16
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 7 Region: 906-968
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.92e-16
Family Complement control module/SCR domain 0.00076
Further Details:      
 
Domain Number 8 Region: 671-740
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 6.67e-16
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 9 Region: 729-798
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000431
Family Complement control module/SCR domain 0.0022
Further Details:      
 
Domain Number 10 Region: 788-852
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000195
Family Complement control module/SCR domain 0.0033
Further Details:      
 
Domain Number 11 Region: 46-171
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000204
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 12 Region: 459-497
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000328
Family EGF-type module 0.012
Further Details:      
 
Domain Number 13 Region: 17-57
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000899
Family EGF-type module 0.022
Further Details:      
 
Domain Number 14 Region: 498-550
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000298
Family Complement control module/SCR domain 0.0022
Further Details:      
 
Weak hits

Sequence:  gi|449666908|ref|XP_002154505.2|
Domain Number - Region: 2-19
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0458
Family EGF-type module 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|449666908|ref|XP_002154505.2|
Sequence length 1247
Comment PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1, partial [Hydra magnipapillata]
Sequence 
INNFTCICQENYKGKFCSEKKPMCDTKMCSNGGTCYEIPDGIECSCAPGLTGKYCEEIID
ECASSPCKNEGTCVDSHRGYQCLCKSGFTGALCQDNVDDCYNNACLNKGVCIDGVNRFSC
SCVKGYSGERCEINVNDCFSSPCRNGGSCIDQVNGYKCQCPSTFSGPTCETRNAVSNFDL
VFDRTVQGYAKSTINELIDEFTVAFWLKTSPTEIESGTVLSYAIGDSDSFVDNALVLGNM
NHVMLNIMGEEAPTNISVADGSWHHVAIVWSSKSGKYQTFKDGIKIAEDINFQKGKAIPA
GGVFIIGQEQDEVGRNFSASEAFDGHLSQLNMWNYVMTENEILGMSSYRCDMLFGNIVAW
ADFNNPSIDVKKVVGFCTNSQSKFHPWSTSQVIPCPGQVISAQCLTLDKMGIKELNLFGA
TCTTKGFFCSNADQKKFDVNNNVVCPSQMQVRFECPYTGVNDCLFNKCNGNGLCIDTLQG
YICRCNDGFYGKNCENELPCTSLQPFVNGIVSQTNGLVTISCRPGFKLIGSSSLHCVKGK
YNKEIPECIDLDECLYSNGNCQHKCLNTIGSYLCQCNEGFEMQGSTCVDINECLTNNGNC
QDKCFNTYGSYSCQCRAGFKISSNLRSCQDIDECVGTHDCSQLCVNTQGSYKCQCKPGFV
LAGNGKSCQKILCPQLNAPTNGYVSHSTGDFGLKATFTCEDKYRLDGSSQTVCGADGKWS
GILPRCKKITCGTLPSPYNGQATLVGAGLNAEYRFFCLKGFLLFGSETRTCRYNGSWSGD
QPRCVPYNCPPLTKPENGVILGSSLNQGATVMIKCEKGFMLSNKNLNYRICQVDGKWSHN
DAQCVPVSCGKPEALDNGTFTGSSFKIDDVITYKCNDGFGLSGPFQRTCLLSGEWSGISP
KCLYNSCGYPGLPKYGILDGTVFSFGKTVNYSCSSGYKLIGDTSRKCMLSGTWSGTLPIC
QEITCGDPGFPENGLRLGNSFSINATVLFDCNAGYSLKGARSIVCGLNGVWSNLLPQCKV
GLCGSQKLVGPSGTITSPNYPNSYSNQEYCRWNIVMPLNKKAVLDVRTLKTVGPNDRLEI
FDGVSQNLLTVLHGAIPQSIRITSSSNVIDARFVTTGENSADGFTADYTSSECGGHITTI
GQVITTPNYPSNYPNGIICTWQVMLPNNNIVLAFEQFNTDQRDELEAWSSVTSLSAHAKI
GTWSGNRGSFLTIDSSGIMYLKFSSDDFHSNVGFKAVVKKRTGTINA
Download sequence
Identical sequences gi|449666908|ref|XP_002154505.2|

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.