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  Home > Genomes > Hydra vulgaris > gi|449667989|ref|XP_002160198.2|

Domain assignment for gi|449667989|ref|XP_002160198.2| from Hydra vulgaris

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|449667989|ref|XP_002160198.2|
Domain Number 1 Region: 585-768
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.09e-30
Family Pentraxin (pentaxin) 0.0017
Further Details:      
 
Domain Number 2 Region: 861-1008
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 5.29e-24
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.001
Further Details:      
 
Domain Number 3 Region: 1097-1238
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000000989
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 4 Region: 1291-1355
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000108
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 5 Region: 1407-1467
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000139
Family Complement control module/SCR domain 0.0026
Further Details:      
 
Domain Number 6 Region: 1538-1590
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000124
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 7 Region: 337-379
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000255
Family EGF-type module 0.0051
Further Details:      
 
Domain Number 8 Region: 1252-1302
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000306
Family Complement control module/SCR domain 0.0029
Further Details:      
 
Domain Number 9 Region: 171-320
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000381
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 10 Region: 1018-1057
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000328
Family EGF-type module 0.0095
Further Details:      
 
Domain Number 11 Region: 1351-1415
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000106
Family Complement control module/SCR domain 0.0037
Further Details:      
 
Domain Number 12 Region: 1470-1534
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000181
Family Complement control module/SCR domain 0.0037
Further Details:      
 
Domain Number 13 Region: 375-417
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000162
Family EGF-type module 0.0084
Further Details:      
 
Domain Number 14 Region: 490-534
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000239
Family EGF-type module 0.016
Further Details:      
 
Domain Number 15 Region: 529-569
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000326
Family EGF-type module 0.017
Further Details:      
 
Domain Number 16 Region: 1607-1671
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000000484
Family Spermadhesin, CUB domain 0.0071
Further Details:      
 
Domain Number 17 Region: 449-491
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000634
Family EGF-type module 0.017
Further Details:      
 
Domain Number 18 Region: 415-457
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000798
Family EGF-type module 0.022
Further Details:      
 
Weak hits

Sequence:  gi|449667989|ref|XP_002160198.2|
Domain Number - Region: 1069-1112
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00043
Family Complement control module/SCR domain 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|449667989|ref|XP_002160198.2|
Sequence length 1689
Comment PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Hydra magnipapillata]
Sequence 
MDCNAIFANNTCHCSEWRWKDQTNGNEQETSTELTYEGDCHSKAVQEQIKNEFLKSLCLY
CDFDSLEVFCGSASLVFRRKRSTFKTVSIKASVLLKVSKEEIRNNAVVAKQILKNQINQE
MPKFINRVKNFKEWSAVLLKPSAFRSVNLIGNVKEVCGDPADIQDLTQRLDERCVVCGAG
TFKNFTSNKCEKCPDGMFQPNPGQTKCLSCPPGSIATERDSKDFTSCKELCLPGHYSMNG
FSPCNQCPLGTYTNVSRSTSCVKCPTGTTTFQFGATSVFDCGTACLPGTYSANRVEPCLR
CPKGQYQDKYGQVKCEWCPDLKTTSSIGSVSVSSCLDINDCSSSPCLNGGHCIDLRDDFR
CECQKGFWGETCEKEVDECQLQPCINNGTCLDKFQSYKCICRPGTGGDNCGQVLKKCTTN
HCGKNGRCIDLADQKTKCVCNDLFVGEFCEGKVDPCYPDPCSGVGFCEPIGNNFKCHCLR
GYTGETCQNKWNFCDSGPCQNNGLCHDKKTGFLCECAPGYHGEQCQHKFNMCVYKKCHNG
GVCQSISGDINCLCAPGFSGKQCDKRETEDFDLSFQSTLSPSFSSVHGRKDLSSFSIAFW
MRTSNKEKFGTPLSYAVKLENGVVDDNALVLTDYTNFIIFINNQSQSLGFGANDGKWRHI
VVTWSSSSGLLTSYKDGVLQKRGSIPIEQGKKIPKGGIFIIGEEQDEFGAGFTPAESFYG
DLSQLNVWDYQLEEKEVYNMATKCFHAIGNVIAWSDFNSQSHGAVVKTSPSLACNYQSTL
REFQYLKNMKFADNILKNDKLAIQKPTFTSEECSKQCAETAGCHSFIINKDRGCTMLSAS
PIIDESVPITSYNDDLYFSNCVAPLGMGDKRIPNTDITGMSVKGQAYGHLARLHNVPEGD
KKVAFWQPSAGKKDELIEIKLGKLTRITGIATQGHYDENIQEFVSNFNVYYNDMNTWKEY
PKTFKANTGPIDVVRNDLNIITDIVRLKVTNQGSTDSIALRIELYGCPLDPQGVPIIRQD
VNDCKANPCKNGATCIDLYQAFFCKCQLGYSGKNCESSDCSVNDIDAPIHGLIIKHSEYA
EFKCETGYQLVGISQIKCLNGIYQDHRVPECVDIDECKLKYCSDGCENTIGSFKCYCPIG
KILDPRNQMSCYDENECQRNTGCEFGCDDLVGSFSCKCPKGYFHQPGQRYCYDFNECDSS
STNKCEQLCQNTLGSYVCSCRPGYMLAPDGFSCIFQKCSDLPVQIKNGVCKVTKDIAVYS
CDTGYKLNGVKERFCAADKTWSGSVPFCQPIKCVEIFAPENGQIKLDGFHFNAKATVTCN
PNFKLFGSSVRYCTANGWDGMPPYCSVEVCPPFFVLNGRTLGTSPVVGSAVRIECDTGYT
LIQQNLLYRTCQSNGQWTGGNQASIECKIIECGPVENTGNTRYEYVGGQKYNNIVKYSCV
AGHCLEGSSVRRCQANGKWSDNAPKCISNSCCSPYVPPHSKLYSDNSFSPGEYVYIKCDQ
GYKSSGTELRICQKELVWSGEDTTCNIVDCGHPTGNQIMKNGEIHMSKTTYLARALFYCQ
PGYLIVGSTERICQANGNWSGNVPVCIKDANGGHVRKESGSLVCLHQSICHWLIQVTQGK
KITLDFLTYDVQNGGKTEVYDGENFKEPFITFTKGFEPRKITSNSHFIRIISSGYITFNF
SESLPLFSV
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Identical sequences gi|449667989|ref|XP_002160198.2|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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